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sw_11_scaffold_543

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_543_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..344
DNA (342bp) protein (114aa)
ArgK-type transport ATPase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQZ7_NATPD
argK; transport ATPase, component for LAO/AO transport systems
YgfD family GTPase {ECO:0000313|EMBL:CAI49447.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_11_scaffold_543_2
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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379..2292
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V3J7_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45905.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_11_scaffold_543_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2344..4170)
DNA (1827bp) protein (609aa)
GTP-binding protein TypA n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5C1_SALRD
typA; GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:ABC45006.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_11_scaffold_543_4
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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4483..4764
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VI44_9CYAN
protein of unknown function DUF433
Uncharacterized protein {ECO:0000313|EMBL:AFZ07157.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 711
sw_11_scaffold_543_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4761..4991
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70528.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
sw_11_scaffold_543_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5198..5497)
DNA (300bp) protein (100aa)
4-coumarate--CoA ligase (EC:6.2.1.12)
4-coumarate--CoA ligase {ECO:0000313|EMBL:AEN72609.1}; EC=6.2.1.12 {ECO:0000313|EMBL:AEN72609.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
4-coumarate--CoA ligase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH91_RHOMR
sw_11_scaffold_543_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5798..6805)
DNA (1008bp) protein (336aa)
ilvA; serine/threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] id=24659215 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ilvA; Threonine dehydratase biosynthetic
Threonine dehydratase {ECO:0000313|EMBL:ABC46151.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_11_scaffold_543_8
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(6865..8001)
DNA (1137bp) protein (379aa)
Choline monooxygenase n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PP78_MEIRD
Strain A contig00008, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ55525.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiotherm
choline monooxygenase
sw_11_scaffold_543_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8263..9105
DNA (843bp) protein (281aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Tryptophan synthase beta chain n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF43_RHOMR
sw_11_scaffold_543_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9124..9645
DNA (522bp) protein (174aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Tryptophan synthase beta chain n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI76_RHOM4
pyridoxal-phosphate dependent TrpB-like protein
sw_11_scaffold_543_11
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9682..11262)
DNA (1581bp) protein (527aa)
endo-1,4-beta-xylanase (EC:3.2.1.8)
Endo-1,4-beta-xylanase, family GH5 {ECO:0000313|EMBL:CAZ97654.1}; EC=3.2.1.8 {ECO:0000313|EMBL:CAZ97654.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacter
xylanase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B76675
sw_11_scaffold_543_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(11327..11989)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H605_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23460.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 12 items

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