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sw_11_scaffold_585

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_585_1
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..189)
DNA (189bp) protein (63aa)
30S ribosomal protein S15 n=2 Tax=Halobacterium salinarum RepID=RS15_HALSA
rps15p; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000313|EMBL:CAP13525.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;
sw_11_scaffold_585_2
unknown

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comp(897..1229)
DNA (333bp) protein (111aa)

This feature has no annotations

sw_11_scaffold_585_3
unknown

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comp(1242..1868)
DNA (627bp) protein (209aa)

This feature has no annotations

sw_11_scaffold_585_4
unknown

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comp(2518..2676)
DNA (159bp) protein (53aa)

This feature has no annotations

sw_11_scaffold_585_5
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3107..3946)
DNA (840bp) protein (280aa)
MscS Mechanosensitive ion channel n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PPC3_9EURY
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EMA70725.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense
MscS Mechanosensitive ion channel
sw_11_scaffold_585_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4307..5116
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INH5_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50328.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_585_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5117..5524)
DNA (408bp) protein (136aa)
YneT family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL53_NATM8
YneT family protein
YneT family protein {ECO:0000313|EMBL:CCQ37104.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_11_scaffold_585_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5799..7181
DNA (1383bp) protein (461aa)
Hypothetical membrane protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PG45_9EURY
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:CCQ34656.1}; Uncharacterized protein {ECO:0000313|EMBL:ERJ06291.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
sw_11_scaffold_585_9

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comp(7199..7999)
DNA (801bp) protein (267aa)
Digeranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01286}; Short=DGGGP synthase {ECO:0000256|HAMAP-Rule:MF_01286};; Short=DGGGPS {ECO:0000256|HAMAP-Rule:MF_01286};; EC=2.5.1.42 {EC
Geranylgeranylglycerol-phosphate geranylgeranyltransferase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XPL5_9ARCH
ubiA; prenyltransferase
sw_11_scaffold_585_10
unknown

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comp(8092..8526)
DNA (435bp) protein (145aa)

This feature has no annotations

sw_11_scaffold_585_11
unknown

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comp(8523..8930)
DNA (408bp) protein (136aa)

This feature has no annotations

sw_11_scaffold_585_trna_1
unknown

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9117..9191
DNA (75bp)
transferRNA
sw_11_scaffold_585_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9805..10128)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE36_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21495.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
transcriptional regulator with sigma factor-related N-terminal domain
sw_11_scaffold_585_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10222..10539
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE15_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21496.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_11_scaffold_585_14
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10524..10838)
DNA (315bp) protein (105aa)
Nucleoside-triphosphatase J07HQW1_01403 {ECO:0000256|HAMAP-Rule:MF_00796}; Short=NTPase {ECO:0000256|HAMAP-Rule:MF_00796};; EC=3.6.1.15 {ECO:0000256|HAMAP-Rule:MF_00796};; Nucleoside triphosphate phos
Nucleoside-triphosphatase J07HQW1_01403 n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1MNG7_9EURY
putative nucleotide kinase
sw_11_scaffold_585_15
unknown

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comp(10862..11065)
DNA (204bp) protein (68aa)

This feature has no annotations

sw_11_scaffold_585_16

Not on your lists

11167..12093
DNA (927bp) protein (309aa)
ADP-ribosyl-(dinitrogen reductase) hydrolase (EC:3.2.2.24)
ADP-ribosyl-(Dinitrogen reductase) hydrolase {ECO:0000313|EMBL:AEN07471.1}; EC=3.2.2.24 {ECO:0000313|EMBL:AEN07471.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
ADP-ribosylation/Crystallin J1 n=3 Tax=Archaea RepID=B9LVX2_HALLT
Displaying 17 items

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