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sw_11_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_6_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(320..1081)
DNA (762bp) protein (254aa)
ABC-type multidrug transport system, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQ02_HALBP
multidrug ABC transporter permease
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:ADQ67747.1}; Multidrug ABC transporter permease {ECO:0000313|EMBL:ELY23571.1}; TaxID=469382 species="Archaea; Euryarchaeota; H
sw_11_scaffold_6_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1078..2169)
DNA (1092bp) protein (364aa)
ABC transporter n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MJS6_HALMO
ABC transporter {ECO:0000313|EMBL:EMA45947.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
ABC-type multidrug transport system, ATPase component
sw_11_scaffold_6_3
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2328..4130)
DNA (1803bp) protein (601aa)
HTR-like protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0II37_9EURY
HTR-like protein {ECO:0000313|EMBL:ELZ95119.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
htlD25; HTR-like protein
sw_11_scaffold_6_4
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4218..5411)
DNA (1194bp) protein (398aa)
Acyl-CoA dehydrogenase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IAU3_HALRX
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGB15859.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
sw_11_scaffold_6_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5517..6290)
DNA (774bp) protein (258aa)
TRAP transporter solute receptor, TAXI family protein {ECO:0000313|EMBL:ELZ28399.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" sour
sw_11_scaffold_6_6
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6432..7661
DNA (1230bp) protein (410aa)
Phytoene/squalene synthetase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IAM1_HALRX
phytoene/squalene synthetase
Phytoene/squalene synthetase {ECO:0000313|EMBL:AGB15858.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18
sw_11_scaffold_6_7
unknown

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8358..9392
DNA (1035bp) protein (345aa)

This feature has no annotations

sw_11_scaffold_6_8
unknown

Not on your lists

9669..10763
DNA (1095bp) protein (365aa)

This feature has no annotations

sw_11_scaffold_6_9
unknown

Not on your lists

comp(11045..12148)
DNA (1104bp) protein (368aa)

This feature has no annotations

sw_11_scaffold_6_10
unknown

Not on your lists

12391..12732
DNA (342bp) protein (114aa)

This feature has no annotations

sw_11_scaffold_6_11
unknown

Not on your lists

12760..13512
DNA (753bp) protein (251aa)

This feature has no annotations

sw_11_scaffold_6_12
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13665..15320)
DNA (1656bp) protein (552aa)
Subtilisin protein {ECO:0000313|EMBL:ERJ05505.1}; EC=3.1.3.1 {ECO:0000313|EMBL:ERJ05505.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus
Subtilisin protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2F5I4_9EURY
FG-GAP repeat-containing protein, possibly sugar-related
sw_11_scaffold_6_13
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15891..17396
DNA (1506bp) protein (502aa)
PQQ repeat protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K4P6_9EURY
PQQ repeat protein
PQQ repeat protein {ECO:0000313|EMBL:AGB39530.1}; Flags: Precursor;; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occ
sw_11_scaffold_6_14
unknown

Not on your lists

17443..17964
DNA (522bp) protein (174aa)

This feature has no annotations

sw_11_scaffold_6_15
unknown

Not on your lists

comp(18066..18266)
DNA (201bp) protein (67aa)

This feature has no annotations

sw_11_scaffold_6_16
unknown

Not on your lists

comp(18632..18793)
DNA (162bp) protein (54aa)

This feature has no annotations

sw_11_scaffold_6_17
unknown

Not on your lists

18840..19628
DNA (789bp) protein (263aa)

This feature has no annotations

sw_11_scaffold_6_18
unknown

Not on your lists

19629..19853
DNA (225bp) protein (75aa)

This feature has no annotations

sw_11_scaffold_6_19
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19859..20719)
DNA (861bp) protein (287aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JKF8_NATP1
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AGB31759.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (stra
sw_11_scaffold_6_20

Not on your lists

comp(20836..21255)
DNA (420bp) protein (140aa)
Molecular chaperone, small heat shock protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y0T5_9ARCH
Molecular chaperone, small heat shock protein {ECO:0000313|EMBL:ESS06181.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
molecular chaperone (small heat shock protein)
sw_11_scaffold_6_21
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21391..22083
DNA (693bp) protein (231aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E7E3_9EURY
tRNA ribose 2'-O-methyltransferase
sw_11_scaffold_6_22
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22387..22926
DNA (540bp) protein (180aa)
Transcription factor E n=2 Tax=Haloferax RepID=M0GHB9_9EURY
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
tfeA; transcription initiation factor IIE alpha subunit-like protein
sw_11_scaffold_6_23
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22927..23637
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BU64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ14556.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_11_scaffold_6_24
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23634..24401
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYF6_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB59857.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigen
sw_11_scaffold_6_25
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24418..25539)
DNA (1122bp) protein (374aa)
alpha\beta hydrolase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B62D89
Alpha/beta hydrolase {ECO:0000313|EMBL:ESP88555.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
alpha/beta hydrolase fold protein
sw_11_scaffold_6_26
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25670..26380
DNA (711bp) protein (237aa)
Molybdopterin binding domain protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LSD2_9EURY
Molybdopterin binding domain protein {ECO:0000313|EMBL:EMA36018.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisals
molybdopterin binding domain-containing protein
sw_11_scaffold_6_27
unknown

Not on your lists

comp(26431..26553)
DNA (123bp) protein (41aa)

This feature has no annotations

sw_11_scaffold_6_28
unknown

Not on your lists

comp(26603..27253)
DNA (651bp) protein (217aa)

This feature has no annotations

sw_11_scaffold_6_trna_1
unknown

Not on your lists

27403..27509
DNA (107bp)
transferRNA
sw_11_scaffold_6_29
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27668..28753
DNA (1086bp) protein (362aa)
ATP-NAD kinase n=2 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VHL9_HALJB
ATP-NAD kinase {ECO:0000313|EMBL:ELY36579.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strain
homolog to NAD kinase
Displaying items 1-30 of 152 in total

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