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sw_11_scaffold_611

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_611_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2..700
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZKX5_TERRK
protein of unknown function DUF1080
Uncharacterized protein {ECO:0000313|EMBL:AHG93132.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_11_scaffold_611_2
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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758..2122
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003621270
NAD(P)-dependent dehydrogenase {ECO:0000313|EMBL:AHM60752.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flamm
oxidoreductase domain-containing protein
sw_11_scaffold_611_3
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2171..2833
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6A5_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV61806.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Iso
sw_11_scaffold_611_4
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2926..4002
DNA (1077bp) protein (359aa)
Dehydrogenase-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYA7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01823.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_11_scaffold_611_5

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comp(4013..5062)
DNA (1050bp) protein (350aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Bacteroides RepID=E2NEC8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKK96541.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
sw_11_scaffold_611_6
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5079..6176
DNA (1098bp) protein (366aa)
Blue (Type 1) copper domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ77_PEDHD
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACU02559.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedob
sw_11_scaffold_611_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6173..7678
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035F6DC0
Glucose/sorbosone dehydrogenase-like protein {ECO:0000313|EMBL:CCH54620.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi
glucose/sorbosone dehydrogenase
sw_11_scaffold_611_trna_1
unknown

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comp(7891..7974)
DNA (84bp)
transferRNA
sw_11_scaffold_611_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8110..8688)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25075.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_611_9
unknown

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8748..9443
DNA (696bp) protein (232aa)

This feature has no annotations

sw_11_scaffold_611_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9777..10451
DNA (675bp) protein (225aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494, ECO:0000313|EMBL:CBH25076.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Probable transaldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM1_SALRM
tal; transaldolase
sw_11_scaffold_611_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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10597..11991
DNA (1395bp) protein (465aa)
Ysh1p: subunit of polyadenylation factor I
Ysh1p: subunit of polyadenylation factor I id=24657869 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ysh1p: subunit of polyadenylation factor I, putative {ECO:0000313|EMBL:ABC46323.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
sw_11_scaffold_611_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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12185..13282
DNA (1098bp) protein (366aa)
Glycolate oxidase subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM3_SALRM
glcD; glycolate oxidase subunit
Glycolate oxidase subunit {ECO:0000313|EMBL:CBH25078.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
Displaying 13 items

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