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sw_11_scaffold_640

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_640_1
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(387..1106)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K437_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA15961.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
sw_11_scaffold_640_2
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1125..1853)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K3F1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA15962.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_11_scaffold_640_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1935..2684
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:ERJ07456.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_11_scaffold_640_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2767..4233)
DNA (1467bp) protein (489aa)
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=24646829 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=108502
secY; preprotein translocase subunit SecY (TC 3.A.5.1.1)
sw_11_scaffold_640_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4235..4732)
DNA (498bp) protein (166aa)
50S ribosomal protein L15P n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKR4_9EURY
50S ribosomal protein L27Ae (L15p)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
sw_11_scaffold_640_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4732..5196)
DNA (465bp) protein (155aa)
50S ribosomal protein L30P n=1 Tax=halophilic archaeon J07HX64 RepID=U1QYE1_9EURY
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
rpl30p; 50S ribosomal protein L30P
sw_11_scaffold_640_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5193..5831)
DNA (639bp) protein (213aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=24646826 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
SSU ribosomal protein S5P {ECO:0000313|EMBL:ERH10991.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rps5p; 30S ribosomal protein S5P
sw_11_scaffold_640_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5828..6388)
DNA (561bp) protein (187aa)
rpl18p; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 id=24649911 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
rpl18p; 50S ribosomal protein L18P
sw_11_scaffold_640_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6385..6831)
DNA (447bp) protein (149aa)
rpl19e; 50S ribosomal protein L19e; K02885 large subunit ribosomal protein L19e id=24646824 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rpl19e; 50S ribosomal protein L19
sw_11_scaffold_640_10
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6828..7826)
DNA (999bp) protein (333aa)
50S ribosomal protein L32e n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8Y2_9EURY
50S ribosomal protein L32e
50S ribosomal protein L32e {ECO:0000313|EMBL:AGN02183.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bs
sw_11_scaffold_640_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7826..7978)
DNA (153bp) protein (51aa)
50S ribosomal protein L6 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4D6_HALMD
rpl6p; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoha
Displaying 11 items

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