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sw_11_scaffold_71

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_71_1
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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274..1038
DNA (765bp) protein (255aa)
Lipoate-protein ligase A-like protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RV00_HALTV
Lipoate-protein ligase A-like protein
Lipoate-protein ligase A-like protein {ECO:0000313|EMBL:ADB59293.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena tur
sw_11_scaffold_71_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1087..3633
DNA (2547bp) protein (849aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEI8_9EURY
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EJN58399.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogran
oligopeptide/dipeptide ABC transporter ATP-binding protein
sw_11_scaffold_71_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3853..5412
DNA (1560bp) protein (520aa)
Family 5 extracellular solute-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYM8_9EURY
Family 5 extracellular solute-binding protein {ECO:0000313|EMBL:ELZ27748.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halos
family 5 extracellular solute-binding protein
sw_11_scaffold_71_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5547..6572
DNA (1026bp) protein (342aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0R6_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:ELZ27749.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimple
dppB; ABC-type dipeptide/oligopeptide/nickel transport systems, permease
sw_11_scaffold_71_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6757..7701
DNA (945bp) protein (315aa)
dppC4; dipeptide/oligopeptide/nickel ABC transporter permease; K12370 dipeptide transport system permease protein id=24630038 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ERG92315.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; H
dppC4; ABC-type transport system permease protein (probable substrate dipeptide/oligopeptide/nickel)
sw_11_scaffold_71_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7776..8162
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N325_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52357.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_11_scaffold_71_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8250..8738
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92227.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_11_scaffold_71_8
unknown

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comp(8780..9118)
DNA (339bp) protein (113aa)

This feature has no annotations

sw_11_scaffold_71_9
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9178..9936)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YE27_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD51981.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
hypothetical protein
sw_11_scaffold_71_10
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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10468..10800
DNA (333bp) protein (111aa)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DHH3_9EURY
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:ELZ94238.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofera
succinate dehydrogenase, cytochrome b556 subunit
sw_11_scaffold_71_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10793..11173
DNA (381bp) protein (127aa)
succinate dehydrogenase n=1 Tax=Halomicrobium katesii RepID=UPI00037D87FE
succinate dehydrogenase subunit D
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:ACV48190.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium m
sw_11_scaffold_71_12

Not on your lists

11189..12103
DNA (915bp) protein (305aa)
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:ESS10761.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ESS10761.1};; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60
Succinate dehydrogenase subunit B n=1 Tax=uncultured archaeon A07HR60 RepID=V4YCQ8_9ARCH
succinate dehydrogenase and fumarate reductase iron-sulfur protein
sw_11_scaffold_71_13
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12167..12961)
DNA (795bp) protein (265aa)
Transcriptional regulator n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EIW1_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ46354.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284
transcriptional regulator
sw_11_scaffold_71_14
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13601..14458)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLA1_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA34362.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_11_scaffold_71_15
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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14841..18599
DNA (3759bp) protein (1253aa)
Elongation factor 2 n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M749_9EURY
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natria
translation elongation factor aEF-2
sw_11_scaffold_71_16
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(18822..19052)
DNA (231bp) protein (77aa)
Transcriptional regulator n=1 Tax=Halonotius sp. J07HN6 RepID=U1NZ62_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ERH02819.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
AsnC family transcriptional regulator
sw_11_scaffold_71_17
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(19054..19740)
DNA (687bp) protein (229aa)
TrkA-N domain protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SWU1_NATMM
TrkA-N domain-containing protein
TrkA-N domain protein {ECO:0000313|EMBL:ADD05823.1}; TrkA-N domain-containing protein {ECO:0000313|EMBL:ELY30101.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialba
sw_11_scaffold_71_18
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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19844..20074
DNA (231bp) protein (77aa)
Transcriptional regulator n=1 Tax=Natronococcus occultus SP4 RepID=L0JW63_9EURY
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGB36319.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_11_scaffold_71_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(20056..21228)
DNA (1173bp) protein (391aa)
Pyruvate dehydrogenase E1 component, alpha subunit n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VT80_9EURY
3-methyl-2-oxobutanoate dehydrogenase subunit alpha Tax=RBG_16_Euryarchaeota_68_13_curated
pyruvate dehydrogenase E1 component, alpha subunit
sw_11_scaffold_71_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21421..22002
DNA (582bp) protein (194aa)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1132509 species="Archaea; Euryarchaeo
Probable thymidylate kinase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4P6_9EURY
thymidylate kinase
sw_11_scaffold_71_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22034..22369)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBX2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA55467.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_11_scaffold_71_22
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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22661..23110
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) RepID=B0R7G2_HALS3
Uncharacterized protein {ECO:0000313|EMBL:CAP14681.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (
hypothetical protein
sw_11_scaffold_71_23
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(23199..23483)
DNA (285bp) protein (95aa)
Translation initiation factor 1A n=1 Tax=Halorubrum sp. J07HR59 RepID=U1QDX6_9EURY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
translation initiation factor 1a (aeif-1a)
sw_11_scaffold_71_24

Not on your lists

23631..27206
DNA (3576bp) protein (1192aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=halophilic archaeon DL31 RepID=G2MMR2_9ARCH
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEN06610.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_71_25

Not on your lists

27409..28005
DNA (597bp) protein (199aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=halophilic archaeon DL31 RepID=G2MMR2_9ARCH
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEN06610.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Displaying 25 items

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