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sw_11_scaffold_86

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_86_1
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..246)
DNA (246bp) protein (82aa)
Transcriptional regulator, AsnC family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LX50_HALLT
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACM59041.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusp
sw_11_scaffold_86_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

387..707
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LX49_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM59040.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_11_scaffold_86_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

733..1317
DNA (585bp) protein (195aa)
Alkyl hydroperoxide reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGI0_9EURY
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:ELZ22361.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
redoxin
sw_11_scaffold_86_4

Not on your lists

comp(1702..2886)
DNA (1185bp) protein (395aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZMI3_9ARCH
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ESS03665.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sugar ABC transporter ATP-binding protein
sw_11_scaffold_86_5
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2883..3860)
DNA (978bp) protein (326aa)
binding-protein-dependent transport system inner membrane protein id=24643931 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERH13642.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;
binding-protein-dependent transport system inner membrane protein
sw_11_scaffold_86_6
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3857..4750)
DNA (894bp) protein (298aa)
binding-protein-dependent transport system inner membrane protein id=24653140 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERH13643.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;
binding-protein-dependent transport system inner membrane protein
sw_11_scaffold_86_7

Not on your lists

comp(4836..6227)
DNA (1392bp) protein (464aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR67 RepID=V4XNP0_9ARCH
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:ESS03663.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
twin-arginine translocation pathway signal protein
sw_11_scaffold_86_8
unknown

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comp(6245..6802)
DNA (558bp) protein (186aa)

This feature has no annotations

sw_11_scaffold_86_9
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6817..8085
DNA (1269bp) protein (423aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L7Z2_9EURY
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:EMA28579.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halob
PAS domain S-box
sw_11_scaffold_86_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8082..8891
DNA (810bp) protein (270aa)
photosystem I assembly BtpA; K06971 id=24644396 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH08621.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
photosystem I assembly BtpA
sw_11_scaffold_86_11
unknown

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comp(8963..9127)
DNA (165bp) protein (55aa)

This feature has no annotations

sw_11_scaffold_86_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9243..9800
DNA (558bp) protein (186aa)
Chemotaxis protein CheC n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBG7_9EURY
Chemotaxis protein CheC {ECO:0000313|EMBL:ELZ20565.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
cheC2; chemotaxis protein CheC
sw_11_scaffold_86_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9868..10071
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGH4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ33863.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_11_scaffold_86_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10163..10867)
DNA (705bp) protein (235aa)
PHP domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVX0_HALMD
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:ACV48099.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (stra
sw_11_scaffold_86_15
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11099..12427
DNA (1329bp) protein (443aa)
XerC/D-like integrase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQ37_HALVD
XerC/D-like integrase
XerC/D-like integrase {ECO:0000313|EMBL:ADE01846.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 296
sw_11_scaffold_86_16
unknown

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12565..12669
DNA (105bp) protein (35aa)

This feature has no annotations

sw_11_scaffold_86_17
unknown

Not on your lists

12666..12818
DNA (153bp) protein (51aa)

This feature has no annotations

sw_11_scaffold_86_18
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13309..14325)
DNA (1017bp) protein (339aa)
Linocin_M18 bacteriocin protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AIZ6_NATGS
Linocin_M18 bacteriocin protein {ECO:0000313|EMBL:BAQ71248.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum s
hypothetical protein
sw_11_scaffold_86_19
unknown

Not on your lists

comp(14328..14744)
DNA (417bp) protein (139aa)

This feature has no annotations

sw_11_scaffold_86_20
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14757..15644)
DNA (888bp) protein (296aa)
Uncharacterized protein {ECO:0000313|EMBL:BAQ71246.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidoph
sw_11_scaffold_86_21

Not on your lists

comp(15754..16980)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGT5_NATGS
Uncharacterized protein {ECO:0000313|EMBL:KKN36248.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
sw_11_scaffold_86_22
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17128..18324)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W935_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN01159.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_11_scaffold_86_23
Natrialba phage PhiCh1, Caudovirales, Viruses

Not on your lists

comp(18340..18783)
DNA (444bp) protein (148aa)
Uncharacterized protein n=3 Tax=root RepID=D3T2E6_NATMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAM88768.1}; TaxID=114777 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Natrialba phage PhiCh1.;"
sw_11_scaffold_86_24
unknown

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19485..20054
DNA (570bp) protein (190aa)

This feature has no annotations

sw_11_scaffold_86_25
unknown

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20008..20229
DNA (222bp) protein (74aa)

This feature has no annotations

sw_11_scaffold_86_26
Thermoplasmatales archaeon BRNA1, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

20226..21956
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YNH0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI47363.1}; TaxID=1054217 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon BRNA1.;"
sw_11_scaffold_86_27
unknown

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21956..22402
DNA (447bp) protein (149aa)

This feature has no annotations

sw_11_scaffold_86_28
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22424..22930)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JWL2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA13547.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_11_scaffold_86_29
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23103..23351
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AW17_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ01579.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
hypothetical protein
sw_11_scaffold_86_30

Not on your lists

23348..23731
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V5A0W4_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESS09000.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
Displaying items 1-30 of 38 in total

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