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sw_11_scaffold_886

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_886_1
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(300..725)
DNA (426bp) protein (142aa)
Putative transcriptional regulator n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JQT3_NATP1
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGB33860.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY76590.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natri
sw_11_scaffold_886_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(722..1003)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTH5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA47780.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_11_scaffold_886_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1180..1599
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSV9_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37477.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_11_scaffold_886_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1956..2771)
DNA (816bp) protein (272aa)
Regulatory protein Crp n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEN7_9EURY
Regulatory protein Crp {ECO:0000313|EMBL:ELZ33925.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JC
regulatory protein Crp
sw_11_scaffold_886_5
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3057..4052)
DNA (996bp) protein (332aa)
glycosyl transferase id=24625210 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Glycosyltransferase {ECO:0000313|EMBL:ERG97506.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;"
glycosyl transferase family protein
sw_11_scaffold_886_6
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4043..4678)
DNA (636bp) protein (212aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H2K5_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ77987.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsen
short-chain dehydrogenase
sw_11_scaffold_886_7
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4860..5363
DNA (504bp) protein (168aa)
3-phosphoglycerate kinase n=1 Tax=Halorubrum sp. T3 RepID=UPI000373B109
3-phosphoglycerate kinase {ECO:0000313|EMBL:ELZ90096.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BA
pgp; 3-phosphoglycerate kinase
sw_11_scaffold_886_8
unknown

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comp(5259..5534)
DNA (276bp) protein (92aa)

This feature has no annotations

sw_11_scaffold_886_9
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5828..7297
DNA (1470bp) protein (490aa)
Aldehyde Dehydrogenase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDZ3_9EURY
Aldehyde dehydrogenase {ECO:0000313|EMBL:AHG04849.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
aldehyde dehydrogenase
sw_11_scaffold_886_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7381..8130
DNA (750bp) protein (250aa)
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:AHG04850.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AHG04850.1};; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDZ2_9EURY
sw_11_scaffold_886_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8314..9618
DNA (1305bp) protein (435aa)
Extracellular ligand-binding receptor n=1 Tax=Halobacterium sp. DL1 RepID=G4IDZ1_9EURY
ABC transporter {ECO:0000313|EMBL:AHG04851.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
livJ2; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
sw_11_scaffold_886_12
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9634..10515
DNA (882bp) protein (294aa)
Inner-membrane translocator n=1 Tax=Halobacterium sp. DL1 RepID=G4IDZ0_9EURY
ABC transporter permease {ECO:0000313|EMBL:AHG04852.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
livH; ABC-type branched-chain amino acid transport system, permease I
sw_11_scaffold_886_13
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10515..11507
DNA (993bp) protein (331aa)
Inner-membrane translocator n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY9_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:AHG04853.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source
livM; ABC-type branched-chain amino acid transport systems, permease II
sw_11_scaffold_886_14
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11507..12322
DNA (816bp) protein (272aa)
Sulfate-transporting ATPase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY8_9EURY
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:AHG04854.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
sw_11_scaffold_886_15
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12319..13065
DNA (747bp) protein (249aa)
ABC transporter related protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY7_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHG04855.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacteriu
livF2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
sw_11_scaffold_886_trna_1
unknown

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comp(13625..13699)
DNA (75bp)
transferRNA
sw_11_scaffold_886_16
unknown

Not on your lists

comp(13632..13889)
DNA (258bp) protein (86aa)

This feature has no annotations

sw_11_scaffold_886_17
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14008..14694)
DNA (687bp) protein (229aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1)
Proteasome subunit beta 2 {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit 2 {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein Ps
Proteasome subunit beta 2 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=PSB2_HALTV
sw_11_scaffold_886_18
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14687..15307)
DNA (621bp) protein (207aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
psmA1; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0IU36_9EURY
sw_11_scaffold_886_19
unknown

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comp(15429..15671)
DNA (243bp) protein (81aa)

This feature has no annotations

sw_11_scaffold_886_20
unknown

Not on your lists

16077..16190
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 21 items

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