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sw_11_scaffold_897

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_897_1
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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comp(316..1692)
DNA (1377bp) protein (459aa)
id=24619585 bin=Halonotius_J07HN4 tax=Halonotius_J07HN4
Tax=RBG_16_Chloroflexi_60_22_curated
sw_11_scaffold_897_2
Halonotius_J07HN4, Halonotius, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1975..3573)
DNA (1599bp) protein (533aa)
id=24619584 bin=Halonotius_J07HN4 tax=Halonotius_J07HN4
id=24619584 bin=Halonotius_J07HN4 tax=Halonotius_J07HN4
sw_11_scaffold_897_3
Halonotius_J07HN4, Halonotius, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3958..4479)
DNA (522bp) protein (174aa)
id=24619584 bin=Halonotius_J07HN4 tax=Halonotius_J07HN4
id=24619584 bin=Halonotius_J07HN4 tax=Halonotius_J07HN4
sw_11_scaffold_897_4
unknown

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comp(4522..4728)
DNA (207bp) protein (69aa)

This feature has no annotations

sw_11_scaffold_897_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6187..6969
DNA (783bp) protein (261aa)
nrdA_2; ribonucleoside-diphosphate reductase, alpha subunit 2 (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase,adenosylcobalamin-dependent {ECO:0000313|EMBL:CAI49764.2}; EC=1.17.4.1 {ECO:0000313|EMBL:CAI49764.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria;
Ribonucleoside-diphosphate reductase n=2 Tax=Natronomonas pharaonis RepID=Q3IQ34_NATPD
sw_11_scaffold_897_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7098..8708)
DNA (1611bp) protein (537aa)
rhoM; intramembrane serine protease id=24648782 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Rhomboid family {ECO:0000313|EMBL:ERH09913.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
peptidase
sw_11_scaffold_897_7
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8805..9188)
DNA (384bp) protein (128aa)
Translation initiation factor IF2/IF5 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUA8_HALUD
translation initiation factor IF-2 subunit beta
Translation initiation factor IF2/IF5 {ECO:0000313|EMBL:ACV11005.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus u
sw_11_scaffold_897_8
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9226..10557)
DNA (1332bp) protein (444aa)
MgtC/SapB transporter n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WNF4_9EURY
MgtC/SapB transporter {ECO:0000313|EMBL:ELY50990.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongoli
hypothetical protein
sw_11_scaffold_897_9
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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10883..11077
DNA (195bp) protein (65aa)
Uncharacterized protein id=24619177 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Uncharacterized protein {ECO:0000313|EMBL:ERH06589.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
sw_11_scaffold_897_10

Not on your lists

11082..11729
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XN98_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS03513.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_11_scaffold_897_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11746..12015)
DNA (270bp) protein (90aa)
rpoM3; DNA-directed RNA polymerase subunit M3 (EC:2.7.7.6); K03057 transcription elongation factor id=24645318 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA-directed RNA polymerase, subunit M {ECO:0000313|EMBL:ERH09534.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ERH09534.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source=
tfs3; transcription elongation factor TFS
sw_11_scaffold_897_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12146..12352)
DNA (207bp) protein (69aa)
tp01_2; transport system 1 (substrates cationic amino acids), subunit 2 id=24647682 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Amino acid transporter {ECO:0000313|EMBL:ERH08816.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_11_scaffold_897_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12340..13593)
DNA (1254bp) protein (418aa)
Amino acid transporter n=1 Tax=halophilic archaeon J07HX64 RepID=U1PEM5_9EURY
Amino acid transporter {ECO:0000313|EMBL:ERH08816.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
tp01_2; transport system 1 ( substrates cationic amino acids), subunit 2
sw_11_scaffold_897_14
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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13810..14214
DNA (405bp) protein (135aa)
sdhC; succinate dehydrogenase subunit C (cytochrome b-556) (EC:1.3.99.1)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y8R3_9EURY
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:ELY70041.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema
sw_11_scaffold_897_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14216..14578
DNA (363bp) protein (121aa)
succinate dehydrogenase n=1 Tax=Halomicrobium katesii RepID=UPI00037D87FE
succinate dehydrogenase subunit D
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:EMA45768.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
sw_11_scaffold_897_16
unknown

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14581..14652
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 16 items

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