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sw_11_scaffold_2993_4

Organism: SW_11_UNK

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: comp(1282..3006)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=761659 species="Bacteria; Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 574.0
  • Bit_score: 1066
  • Evalue 0.0
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=24656873 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 575.0
  • Bit_score: 1066
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 574.0
  • Bit_score: 1066
  • Evalue 0.0

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1725
ATGGAGGCCTCCTTTGAGTTCGAGGACACGCCCGATCAGGCGGAGGCCGCCGAGGCGGTGAAGCGGGACATGGCGGACCCGGTGCCGATGGATCGGCTCGTGTGCGGCGACGTGGGCTTCGGCAAGACGGAGGTGGCGGTGCGGGCCGCCTTCAAAGCCGTGCAGGACGGCAAGCAGGTGGCCATGCTCGTGCCCACCACCATTCTCGCCCAGCAGCATCACGCCACGTTCAGCCGCCGCCTAGAGCGCTTTCCGGTGAACGTGGAGGTGCTCTCCCGCTTCCGCAGCCGCGCCGAGCAGACTGAGGTCCTGGAACGGCTGGAACAGGGGCAAGTCGACATCCTCATCGGCACGCACCGCATTACGAGCGACGACGTCACGTTCGACGACCTCGGTCTCCTCATCATCGACGAGGAGCAGCGCTTCGGCGTCAAAACCAAAGAGACGCTCCGCAAGATGCGGGAGGACATCGACACGCTCACGCTCACGGCCACGCCGATTCCGCGAACGCTGCAGTTCTCGCTCCTCGGGGCGCGAGACCTGTCGCTCATCGAAACGCCGCCCCCGAACCGCCAGCCCATCGAGACGGAGGTCCACACCTTCGACGAAGACCTCATCCGCGACGCCATCGTGTACGAGACGAGCCGCGGCGGGCAGGTCTTCTTTATCCACAACCGCGTGAAGACGATCAACGAGGTGGCCGAGATGGTGCGCGCCATGGTGCCCAATGTGCGGGTGGGCGTGGGGCACGGGCAGATGAACTCTAGCGAGCTGGAGGACGTGATGGTTGATTTCCTGAACGAGAAGCTCGACGTGCTCGTCTCCACCTCCATTATCGAAAACGGGCTCGACATCTCGAACGCCAACACGATGATCATCAACCACGCAGGCGAGCACTTCGGGCTCTCCGAGCTGCATCAGCTCCGGGGCCGCGTGGGGCGGTCGCAGCGGAAGGCGTTCTGCTACCTGCTCGTGCCGTCCGTCCACAGCCTCACCGACGACGCCCGCGAGCGGCTGAAGGCGGTGGAGCAGTTCTCGGACCTCGGCAGCGGGTTCGACATTGCCATGCGCGACCTCGACATCCGCGGCGCCGGGGCGCTCTTGGGCGCCGAGCAGAGCGGCTTCATTGAAGACGTGGGCTACGAGACGTACCACAAAATCCTCGACCAGGCCGTGAAGGAGCTGCGGGACGAGGAGTTCGACGACGTGTTCGACGGCGAGGCCGTGCCGCCGGGGCCCGAGACGTCGGTGGACGTGGAGGAGGACGCCTACATCCCCGAGTCGTACCTGCGCGACAACACCGAGCGCCTCAATCTCTACCGCCGCATCAGCGACGCGCCGGACGAGACGACGCTGGTGGACCTGCTCGACGAGATGGAGGACCGCTTCGGCGACGCGCCGGTGCCGGTGCAGAACCTCCTCACGGGCGCCCGACTCCGCCTCCTCGGCGAGCGACTGCGGATGCCGAAGGTGGTCTACAAGAACGAGCGCCTCTTCCTCTACCTCCCCAGCGAGGACGCCGATCCGTACTTCTACGACGAGGTGTTCCACCCGCTCCTGGAGAAGCTCGCCCTGCTCGACCGCGAGTACGTGATGAAGGACGACGTGGAGGGCGGCCTCATGCGGGCCATCGTGCAGGACGTGCCTACACTCGATGACGCGCTACAGATCATGGAAGGCCTGCTGCTGGAGGAGACGGAGACCGTCGCCACCGTAGAGGCCTGA
PROTEIN sequence
Length: 575
MEASFEFEDTPDQAEAAEAVKRDMADPVPMDRLVCGDVGFGKTEVAVRAAFKAVQDGKQVAMLVPTTILAQQHHATFSRRLERFPVNVEVLSRFRSRAEQTEVLERLEQGQVDILIGTHRITSDDVTFDDLGLLIIDEEQRFGVKTKETLRKMREDIDTLTLTATPIPRTLQFSLLGARDLSLIETPPPNRQPIETEVHTFDEDLIRDAIVYETSRGGQVFFIHNRVKTINEVAEMVRAMVPNVRVGVGHGQMNSSELEDVMVDFLNEKLDVLVSTSIIENGLDISNANTMIINHAGEHFGLSELHQLRGRVGRSQRKAFCYLLVPSVHSLTDDARERLKAVEQFSDLGSGFDIAMRDLDIRGAGALLGAEQSGFIEDVGYETYHKILDQAVKELRDEEFDDVFDGEAVPPGPETSVDVEEDAYIPESYLRDNTERLNLYRRISDAPDETTLVDLLDEMEDRFGDAPVPVQNLLTGARLRLLGERLRMPKVVYKNERLFLYLPSEDADPYFYDEVFHPLLEKLALLDREYVMKDDVEGGLMRAIVQDVPTLDDALQIMEGLLLEETETVATVEA*