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sw_11_scaffold_2993_5

Organism: SW_11_UNK

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: comp(2990..4645)

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=24656873 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 461.0
  • Bit_score: 812
  • Evalue 2.00e-232
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=309807 species="Bacteria; Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 461.0
  • Bit_score: 811
  • Evalue 8.00e-232
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 461.0
  • Bit_score: 810
  • Evalue 2.80e-232

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1656
GTGTCGCTTTCCGCCATTGCCAACCGCATCGAGACGACCGCGGCGGTGACGCGCCTCCGCGCCTGGACGGCCGAGGCACAGCGGGGCGACCGCACGCCGACGCTCCACGTGAACGGCGCGGCCGGCTCCCTCCCCGCGTTCCTCCTCTCCCACCTCCACCGCGAGCCCGGCGCGCCCCTCTGCTGCCTTGTGCCCGACGAGGACGCGGCGGCGTACCTCCAGAGCGACCTGGAGCAGCTCGTGGCCGATCCGGAGGAGGACATCCTCCGCGTGCCCGCCACGCAGAAAACGCCGTACGATCCGGGGCAGATGACGGACTCGACCCCGCTCATCGAGCGGGCCGACGCGCTGCAGCGGCTGGCGGAGGGATTCGACGGGATCCTGGTGACGAGCGTGCCCGCCATCGGCGAGCTCGTGCCCCCGCCCCAGGCCGTGCAGCAGGAAACGCTGACTGTGGAGAAAGGCGAGGAGATCTCGCTGGAGGCCCTCGCCGACCGGCTCCTGGAGCAGGGCTTCTCCCCCGTCGAGTTCGTGGAGGAGCCCGGGGAGTTTGCGCGGCGGGGTGGGATTCTCGACGTGTTCCCCTACGCCGGCACCTACCCGGTCCGCATCGACTTTTTCGGGGACGAGATCGACGGGCTGCGTGAGTTCGACCCGCAGACGCAGCGCTCGGTGAGCCGCCTCACCACGGCCCGCCTCGTGCCCAACCTAGAGCGCGAAGAGCAATCCCGACCGCTGTCGGGATCGATCCCCCTCTTCGAGTACCTGCCCGACGACGCGGTGCTCGCCACCGTCGACGAGGCGCAGGTCCGAGAGGGCGCGCAGGCCCAGTACAACGAGGCGGCCGAGGCGTATCGCGAGCGTCGAACAGCGCTCGACGAAAACGACGAGGCGGACGAAGACCCGGATGATCTCACGCCGCCGGACGACCGCTTTCTCGACGGCGATCAGCTCGCGGAGGCCCTGACGCGACATCCGCGGCTGCAGTTTGGCACCTTCACGGAAGACGTGTCCTCCAATGGGACACCTACCGACACGCTCGACCTGGAGGCCGATCCGCAGCCGTCCTTCAACAGCGACATGGACCTGGTGCGGAAGCGGCTCACGGAGAACGGGGACCGGGACCTCGATACGTTCATCCTCTGCGACAGCCACGGGCAGAGCTCGCGCCTCCGCGACTTGCTGGAGAAAGAGATCGACCACGGCTGGGCCCGGCTCGTGGTGGAGTCGCTGCACGAGGGCTTCGAGTGGCCCGGCGCCAAGCTGGCCGTCTACACCGACCACCAGATCTTTAACCGCTACCACCGCCCCTCCACCAAGCAGCGGAAGGGGCACGCGGACGGGATGAACCTCCGCGACATCAAGAATCTCACCCGGGGCGACTTNNNNNNNNNNNAACTTTGCGGACGACGACGTGCTGTACGTGAACGTCCACGCCCTCCACAAGCTCAACAAATACACCGGCAAGGAGGGCCACCAGCCCACCCTCACCAAGCTCGGCTCCGAGCAGTGGGAGAAGAAAAAGAAGCGGACGAAGGACAAGGTGAAGGACATCGCGCGAGATCTCATCAAGCTCTACGCGAAGCGGAAGGCGTCGGACGGCTACGCCTTCTCCAGCGACACCACGTGGCAGCGCGAGATGGAGGCCTCCTTTGA
PROTEIN sequence
Length: 552
VSLSAIANRIETTAAVTRLRAWTAEAQRGDRTPTLHVNGAAGSLPAFLLSHLHREPGAPLCCLVPDEDAAAYLQSDLEQLVADPEEDILRVPATQKTPYDPGQMTDSTPLIERADALQRLAEGFDGILVTSVPAIGELVPPPQAVQQETLTVEKGEEISLEALADRLLEQGFSPVEFVEEPGEFARRGGILDVFPYAGTYPVRIDFFGDEIDGLREFDPQTQRSVSRLTTARLVPNLEREEQSRPLSGSIPLFEYLPDDAVLATVDEAQVREGAQAQYNEAAEAYRERRTALDENDEADEDPDDLTPPDDRFLDGDQLAEALTRHPRLQFGTFTEDVSSNGTPTDTLDLEADPQPSFNSDMDLVRKRLTENGDRDLDTFILCDSHGQSSRLRDLLEKEIDHGWARLVVESLHEGFEWPGAKLAVYTDHQIFNRYHRPSTKQRKGHADGMNLRDIKNLTRGDXXXXXLCGRRRAVRERPRPPQAQQIHRQGGPPAHPHQARLRAVGEEKEADEGQGEGHRARSHQALREAEGVGRLRLLQRHHVAARDGGLL*