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sw_11_scaffold_445_2

Organism: SW_11_UNK

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: comp(1317..1724)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF family sigma factor id=4251576 bin=GWF2_Bacteroidetes_42_66 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 133.0
  • Bit_score: 121
  • Evalue 5.10e-25
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 133.0
  • Bit_score: 121
  • Evalue 7.20e-25
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 127.0
  • Bit_score: 109
  • Evalue 9.70e-22

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Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 408
ATGGAAATTTTTGAAAACCTGATGACGACACTTCTCAACAAAGATGTCCATAACTTTCAGTCCTGGCTTTTAACCGTAACAAAAAACAGTTGCCTGATGCGGCTCCGGGCGCAAAAATCGATAAGAAGGCGCCAACGGAACTATTTAGCTGATGTGGGCAGTTTCATGGAATTGATTGATGAAGTGCATCCTCATGGCGGGCTCGAGACCGAAAGGGATGCTGCCTATTTGGAAAAGGTACTCAATCGACTGAAGGAGGAGCAACGCACTTGCATTGAGATGTTTTATTACCAGGGCAAGACCTACCAGGAAATTGCAGCCGAAAGCGGCTACTCTGTTAAGAAAGTCAAAAGCTATATTCAAAATGGCAAGCGCAATCTTCACAACATGCTCGCTAACGTGACATGA
PROTEIN sequence
Length: 136
MEIFENLMTTLLNKDVHNFQSWLLTVTKNSCLMRLRAQKSIRRRQRNYLADVGSFMELIDEVHPHGGLETERDAAYLEKVLNRLKEEQRTCIEMFYYQGKTYQEIAAESGYSVKKVKSYIQNGKRNLHNMLANVT*