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sw_11_scaffold_445

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_445_1
Reithrodontomys fulvescens, Reithrodontomys, Rodentia, Mammalia, Chordata, Metazoa

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comp(40..1320)
DNA (1281bp) protein (427aa)
Dentin matrix protein 1 (Fragment) n=1 Tax=Peromyscus mexicanus RepID=Q6WST0_PERMX
Dentin matrix protein 1 {ECO:0000313|EMBL:AAQ02299.1}; Flags: Fragment;; TaxID=56213 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Gl
sw_11_scaffold_445_2
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1317..1724)
DNA (408bp) protein (136aa)
RNA polymerase ECF family sigma factor id=4251576 bin=GWF2_Bacteroidetes_42_66 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated
sigma-70 family RNA polymerase sigma factor
sw_11_scaffold_445_3
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2175..3986
DNA (1812bp) protein (604aa)
Alkaline phosphatase D (APaseD) {ECO:0000313|EMBL:EAY24509.1}; EC=3.1.3.1 {ECO:0000313|EMBL:EAY24509.1};; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Micros
Alkaline phosphatase D (APaseD) n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYK6_9BACT
phosphodiesterase/alkaline phosphatase D
sw_11_scaffold_445_4
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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4174..5286
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J5R4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS29448.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
bifunctional enzyme including aminotransferase and chitin synthase
sw_11_scaffold_445_5
Microgenomates bacterium GW2011_GWA2_39_19, Microgenomates, Bacteria

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5309..6322
DNA (1014bp) protein (338aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D8B4_STAHD
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KKR11058.1}; TaxID=1618498 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_39_19.;"
NAD-dependent epimerase/dehydratase
sw_11_scaffold_445_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6471..7178
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2I1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96856.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
sw_11_scaffold_445_7
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

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7259..8275
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1X6_9GAMM
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
hypothetical protein
sw_11_scaffold_445_8
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8352..9326
DNA (975bp) protein (325aa)
YkcC n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FTL4_9RHOB
yfdH; bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage
Tax=BJP_IG2069_Syntrophobacterales_47_18
sw_11_scaffold_445_9
unknown

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comp(9341..9664)
DNA (324bp) protein (108aa)

This feature has no annotations

sw_11_scaffold_445_10
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9661..10338)
DNA (678bp) protein (226aa)
Sulfotransferase domain protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6ASL2_9RHOB
Sulfotransferase domain protein {ECO:0000313|EMBL:EDZ43703.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacter
sulfotransferase domain-containing protein
sw_11_scaffold_445_11
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10331..11398)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXG9_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD08498.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source=
sw_11_scaffold_445_12
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11819..13987
DNA (2169bp) protein (723aa)
Tetratricopeptide TPR_2 repeat-containing protein id=3148545 bin=GWA2_Bacteroidetes_42_15 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
sw_11_scaffold_445_13
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14065..15459)
DNA (1395bp) protein (465aa)
Arginine decarboxylase {ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|SAAS:SAAS00212226};; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiri
Biosynthetic arginine decarboxylase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NT27_9BACT
diaminopimelate decarboxylase
sw_11_scaffold_445_14
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


15834..17285
DNA (1452bp) protein (484aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=525373 species="Bacteria; Bact
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036E5687
arginyl-tRNA synthetase
Displaying 14 items

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