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sw_11_scaffold_9632_2

Organism: SW_11_UNK

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: 1162..1758

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta'' {ECO:0000256|HAMAP-Rule:MF_01324}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01324};; PEP {ECO:0000256|HAMAP-Rule:MF_01324}; Plastid-encoded RNA polymerase subun similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 208.0
  • Bit_score: 165
  • Evalue 6.40e-38
DNA-directed RNA polymerase subunit beta'' n=1 Tax=Equisetum arvense RepID=E3T2V6_EQUAR similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 205.0
  • Bit_score: 156
  • Evalue 3.60e-35
rpoC2; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 165.0
  • Bit_score: 125
  • Evalue 1.90e-26

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Taxonomy

Nephroselmis astigmatica → Nephroselmis → Nephroselmidophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 597
ATGGTGGATTCATGTGATCATCTATTTAACTTGCCATATAATAAAGAAAAGACAGGAGATATTGTTCAAGGTTTACCTAAAATCGAACAATTGTTTGAGGCAAGAAAACAGTTTTACCATAATCCAAAAAGCCTTAGTGTTAAAAACTTTTTCTTTTTTAGGAAGAAAGGTTTATCAGCTTTCATATCAAGTTTCCTTGCAATTCGAAATGTACAGAATCTTTGTGTTCATTGTATCCAGAGAGTTTATCAATCACAGGGTATTTCGTTATCAGATAAACATGTGGAAATCATTGTTCGTCGTATGACTTCATACGTATTGATGCTGCATCCTGCAAATACTTCATTTTTACCTGGTGAAATTGTGCAATATCAGCTATTACAAACACATACCTTTACAAATACTATATTTATACCATATATCGTTGGTATAACAAAAGTGAGCTTGTCAAATTACCGTACATCGTTTTTATCTGCAGCCAGTTTTCAAGAAACTCGCCGAATTTTAATGAATTCAGCTCTTGAAGGATGTATTGACTACCTTGATGAACTTAAGCAACCAGTAATCTTGGGTAAAACAATACCAGCTGGAGCATAA
PROTEIN sequence
Length: 199
MVDSCDHLFNLPYNKEKTGDIVQGLPKIEQLFEARKQFYHNPKSLSVKNFFFFRKKGLSAFISSFLAIRNVQNLCVHCIQRVYQSQGISLSDKHVEIIVRRMTSYVLMLHPANTSFLPGEIVQYQLLQTHTFTNTIFIPYIVGITKVSLSNYRTSFLSAASFQETRRILMNSALEGCIDYLDELKQPVILGKTIPAGA*