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sw_11_scaffold_9632

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_9632_1
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

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3..1145
DNA (1143bp) protein (381aa)
DNA-directed RNA polymerase subunit beta'' {ECO:0000256|HAMAP-Rule:MF_01324}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01324};; PEP {ECO:0000256|HAMAP-Rule:MF_01324}; Plastid-encoded RNA polymerase subun
DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ostreococcus tauri RepID=U3NBW3_OSTTA
DNA-directed RNA polymerase subunit beta''
sw_11_scaffold_9632_2
Nephroselmis astigmatica, Nephroselmis, Nephroselmidophyceae, Chlorophyta, Viridiplantae

Not on your lists

1162..1758
DNA (597bp) protein (199aa)
DNA-directed RNA polymerase subunit beta'' {ECO:0000256|HAMAP-Rule:MF_01324}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01324};; PEP {ECO:0000256|HAMAP-Rule:MF_01324}; Plastid-encoded RNA polymerase subun
DNA-directed RNA polymerase subunit beta'' n=1 Tax=Equisetum arvense RepID=E3T2V6_EQUAR
rpoC2; DNA-directed RNA polymerase subunit beta'
sw_11_scaffold_9632_trna_1
unknown

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1857..1940
DNA (84bp)
transferRNA
sw_11_scaffold_9632_3
Monomastix sp. OKE-1, Monomastix, Monomastigales, Mamiellophyceae, Chlorophyta, Viridiplantae

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2013..2255
DNA (243bp) protein (81aa)
Cytochrome b559 subunit alpha n=1 Tax=Monomastix sp. (strain OKE-1) RepID=C0JWM0_MONSK
Cytochrome b559 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00642, ECO:0000256|RuleBase:RU004529}; PSII reaction center subunit V {ECO:0000256|HAMAP-Rule:MF_00642, ECO:0000256|RuleBase:RU004529}; TaxID=1
cytochrome b559, subunit alpha
sw_11_scaffold_9632_4
Xylochloris irregularis, Xylochloris, Trebouxiophyceae, Chlorophyta, Viridiplantae

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2313..2438
DNA (126bp) protein (42aa)
Cytochrome b559 subunit beta n=1 Tax=Monomastix sp. (strain OKE-1) RepID=C0JWM1_MONSK
Cytochrome b559 subunit beta {ECO:0000256|HAMAP-Rule:MF_00643, ECO:0000256|RuleBase:RU004529}; PSII reaction center subunit VI {ECO:0000256|HAMAP-Rule:MF_00643, ECO:0000256|RuleBase:RU004529}; TaxID=4
cytochrome b559, subunit beta
sw_11_scaffold_9632_5
Roya anglica, Roya, Zygnematales, Zygnemophyceae, Streptophyta, Viridiplantae

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2614..2736
DNA (123bp) protein (41aa)
Photosystem II reaction center protein J n=1 Tax=Euglena viridis RepID=M1EWD2_EUGVI
Photosystem II reaction center protein J {ECO:0000256|HAMAP-Rule:MF_01305}; Short=PSII-J {ECO:0000256|HAMAP-Rule:MF_01305};; TaxID=43943 species="Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae
PsbJ
sw_11_scaffold_9632_6
Pabia signiensis, Pabia, Prasiolales, Trebouxiophyceae, Chlorophyta, Viridiplantae

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2944..3060
DNA (117bp) protein (39aa)
Cytochrome b6-f complex subunit 5 n=2 Tax=Chara vulgaris RepID=PETG_CHAVU
Cytochrome b6-f complex subunit 5 {ECO:0000256|HAMAP-Rule:MF_00432}; Cytochrome b6-f complex subunit PetG {ECO:0000256|HAMAP-Rule:MF_00432}; Cytochrome b6-f complex subunit V {ECO:0000256|HAMAP-Rule:M
Cytochrome B6-F complex subunit 5
sw_11_scaffold_9632_trna_2
unknown

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3235..3305
DNA (71bp)
transferRNA
sw_11_scaffold_9632_trna_8
unknown

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comp(3509..3580)
DNA (72bp)
transferRNA
sw_11_scaffold_9632_7
Lobosphaera incisa, Lobosphaera, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(3661..4794)
DNA (1134bp) protein (378aa)
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=3
ribulose 1,5-bisphosphate carboxylase large subunit (EC:4.1.1.39)
Ribulose bisphosphate carboxylase large chain n=2 Tax=Oocystis RepID=C7BEH6_OOCSO
sw_11_scaffold_9632_trna_7
unknown

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comp(5156..5228)
DNA (73bp)
transferRNA
sw_11_scaffold_9632_trna_6
unknown

Not on your lists

comp(5257..5339)
DNA (83bp)
transferRNA
sw_11_scaffold_9632_trna_5
unknown

Not on your lists

comp(5363..5436)
DNA (74bp)
transferRNA
sw_11_scaffold_9632_trna_4
unknown

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comp(5452..5523)
DNA (72bp)
transferRNA
sw_11_scaffold_9632_8
Monomastix sp. OKE-1, Monomastix, Monomastigales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(5872..6282)
DNA (411bp) protein (137aa)
Photosystem I assembly protein Ycf3 n=1 Tax=Monomastix sp. (strain OKE-1) RepID=C0JWJ5_MONSK
Photosystem I assembly protein Ycf3 {ECO:0000256|HAMAP-Rule:MF_00439}; TaxID=141716 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Monomastigales; Monomastigaceae; Mon
hypothetical protein
sw_11_scaffold_9632_trna_3
unknown

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comp(6328..6398)
DNA (71bp)
transferRNA
sw_11_scaffold_9632_9
Coccomyxa subellipsoidea, Coccomyxa, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(6494..6976)
DNA (483bp) protein (161aa)
Cytochrome b6-f complex subunit 4 n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=E9NPX6_9CHLO
Cytochrome b6-f complex subunit 4 {ECO:0000256|HAMAP-Rule:MF_01344}; 17 kDa polypeptide {ECO:0000256|HAMAP-Rule:MF_01344}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae
petD; cytochrome b6-f complex subunit IV
sw_11_scaffold_9632_10
Monomastix sp. OKE-1, Monomastix, Monomastigales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(7010..7210)
DNA (201bp) protein (67aa)
Cytochrome b6 n=1 Tax=Monomastix sp. (strain OKE-1) RepID=C0JWP3_MONSK
Cytochrome b6 {ECO:0000256|HAMAP-Rule:MF_00633}; TaxID=141716 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Monomastigales; Monomastigaceae; Monomastix.;" source="Mon
cytochrome b subunit of the bc complex
Displaying 18 items

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