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sw_11_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 73 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_110_1
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

222..728
DNA (507bp) protein (169aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
DNA-directed RNA polymerase subunit n=2 Tax=Halobacterium salinarum RepID=B0R3C1_HALS3
rpoM; DNA-directed RNA-polymerase subunit M
sw_11_scaffold_110_2
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(738..1217)
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH04520.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
sw_11_scaffold_110_3

Not on your lists

comp(1219..1452)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YJ94_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11477.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_11_scaffold_110_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1526..2281)
DNA (756bp) protein (252aa)
tRNA (Adenine-N(1))-methyltransferase TrmI {ECO:0000313|EMBL:CAI48269.2}; EC=2.1.1.219 {ECO:0000313|EMBL:CAI48269.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
SAM-dependent methlyltransferase n=1 Tax=Natronomonas pharaonis RepID=UPI00005B8971
methyltransferase
sw_11_scaffold_110_5
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2281..2676)
DNA (396bp) protein (132aa)
Nascent polypeptide-associated complex protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JNB0_NATP1
alpha-NAC-related protein
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinem
sw_11_scaffold_110_6

Not on your lists

comp(2740..3306)
DNA (567bp) protein (189aa)
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y232_9ARCH
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit {ECO:0000313|EMBL:ESS08748.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon
PUA domain containing protein
sw_11_scaffold_110_7
unknown

Not on your lists

3432..3521
DNA (90bp) protein (30aa)

This feature has no annotations

sw_11_scaffold_110_8
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3522..4019)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WF66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY44342.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
hypothetical protein
sw_11_scaffold_110_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4269..5639)
DNA (1371bp) protein (457aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000313|EMBL:ADJ16137.1}; EC=4.3.2.2 {ECO:0000313|EMBL:ADJ16137.1};; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkal
Adenylosuccinate lyase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J891_HALJB
sw_11_scaffold_110_10
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5829..7364
DNA (1536bp) protein (512aa)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BD43_9EURY
Phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:ELZ07539.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegy
AICAR transformylase/IMP cyclohydrolase PurH
sw_11_scaffold_110_11
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7546..8016
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1PD06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89976.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
DUF151 family protein
sw_11_scaffold_110_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8116..9027
DNA (912bp) protein (304aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1I3_HALMD
transferase
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:ACV47191.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source=
sw_11_scaffold_110_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9090..10145
DNA (1056bp) protein (352aa)
Sulfite oxidase-like oxidoreductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEE2_9EURY
Sulfite oxidase-like oxidoreductase {ECO:0000313|EMBL:EMA42785.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
soxA1; sulfite oxidase
sw_11_scaffold_110_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10246..11199
DNA (954bp) protein (318aa)
PfkB domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQG8_9EURY
PfkB domain-containing protein {ECO:0000313|EMBL:EMA46984.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
PfkB domain-containing protein
sw_11_scaffold_110_15

Not on your lists

comp(11225..12094)
DNA (870bp) protein (290aa)
Membrane complex biogenesis protein, BtpA family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XGX3_9ARCH
Membrane complex biogenesis protein, BtpA family {ECO:0000313|EMBL:ESS07409.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
photosystem I assembly BtpA
sw_11_scaffold_110_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12169..13473)
DNA (1305bp) protein (435aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3W7_NATM8
sw_11_scaffold_110_17
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13646..15694
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JZR4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37343.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_11_scaffold_110_18
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16208..16738
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D611_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH37743.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_11_scaffold_110_19
unknown

Not on your lists

comp(16785..17780)
DNA (996bp) protein (332aa)

This feature has no annotations

sw_11_scaffold_110_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17901..19709
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N228_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51926.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_11_scaffold_110_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19792..20898)
DNA (1107bp) protein (369aa)
Membrane protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZE30_9EURY
Membrane protein {ECO:0000313|EMBL:EJN58930.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_11_scaffold_110_22
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21120..21395
DNA (276bp) protein (92aa)
Transcriptional regulator, PadR family n=2 Tax=Halobacteriales RepID=E4NSH2_HALBP
transcriptional regulator, padr family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ADQ66961.1}; Transcriptional regulator, padr family protein {ECO:0000313|EMBL:ELY30042.1}; TaxID=469382 species="Archaea; Euryarchaeota; Haloba
sw_11_scaffold_110_23
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21396..22676)
DNA (1281bp) protein (427aa)
Htr-like protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HEU4_9EURY
Htr-like protein {ECO:0000313|EMBL:ELZ83000.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
htlA; Htr-like protein
sw_11_scaffold_110_24
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22921..23169
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) RepID=Q9HPQ3_HALSA
hypothetical protein
DUF4010 family protein {ECO:0000313|EMBL:CAP14099.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
sw_11_scaffold_110_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23203..24573
DNA (1371bp) protein (457aa)
gabT3; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
Aminotransferase class-III n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZG9_9EURY
Aminotransferase class-III {ECO:0000313|EMBL:EMA38967.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
sw_11_scaffold_110_26
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


24686..25147
DNA (462bp) protein (154aa)
30S ribosomal protein S19e n=2 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AKB2_NATGS
ribosomal protein S19E (S16A)
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium greg
sw_11_scaffold_110_27
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25222..25569
DNA (348bp) protein (116aa)
probable DNA-binding protein id=24649704 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA-binding protein J07HX64_02569 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DNA-binding tfar19-related protein
sw_11_scaffold_110_28

Not on your lists

25895..26533
DNA (639bp) protein (213aa)
Putative PP-loop ATPase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XCL4_9ARCH
Putative PP-loop ATPase {ECO:0000313|EMBL:ESS05644.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_11_scaffold_110_29
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26560..27606
DNA (1047bp) protein (349aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
Modification methylase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1C8_9EURY
DNA methylase N-4/N-6 domain-containing protein
sw_11_scaffold_110_30
unknown

Not on your lists

comp(27830..28138)
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying items 1-30 of 73 in total

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