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sw_11_scaffold_16

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_16_1
unknown

Not on your lists

comp(2..160)
DNA (159bp) protein (53aa)

This feature has no annotations

sw_11_scaffold_16_2
unknown

Not on your lists

comp(354..1112)
DNA (759bp) protein (253aa)

This feature has no annotations

sw_11_scaffold_16_3
unknown

Not on your lists

comp(1118..1549)
DNA (432bp) protein (144aa)

This feature has no annotations

sw_11_scaffold_16_4
unknown

Not on your lists

1870..3390
DNA (1521bp) protein (507aa)

This feature has no annotations

sw_11_scaffold_16_5
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3269..3904)
DNA (636bp) protein (212aa)
Conserved repeat domain protein n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S4J7_9CYAN
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:AFY65090.1}; Flags: Precursor;; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitle
sw_11_scaffold_16_6

Not on your lists

comp(3957..4328)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003B3A235
hypothetical protein
Marine sediment metagenome DNA, contig: S01H4_C02567 {ECO:0000313|EMBL:GAG64123.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
sw_11_scaffold_16_7
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(4330..4818)
DNA (489bp) protein (163aa)
Adhesin-like protein n=1 Tax=Rhodopirellula baltica SH28 RepID=K5DZY8_RHOBT
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AJW70608.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.
sw_11_scaffold_16_8
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4961..5653
DNA (693bp) protein (231aa)
atpD; V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y3W3_9EURY
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271, ECO:0000313|EMBL:ELY68779.1}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1227496 species="Archaea; Euryarchaeota; Halob
sw_11_scaffold_16_9
unknown

Not on your lists

5739..6413
DNA (675bp) protein (225aa)

This feature has no annotations

sw_11_scaffold_16_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7054..7452
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55240.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_11_scaffold_16_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7776..8378)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGL7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60244.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_11_scaffold_16_12
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8579..9844)
DNA (1266bp) protein (422aa)
Peptide chain release factor subunit 1 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LXS7_9EURY
Peptide chain release factor subunit 1 {ECO:0000256|HAMAP-Rule:MF_00424}; Translation termination factor aRF1 {ECO:0000256|HAMAP-Rule:MF_00424}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacte
peptide chain release factor 1
sw_11_scaffold_16_13
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10037..11341)
DNA (1305bp) protein (435aa)
UPF0272 protein C478_08818 n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BTQ5_9EURY
UPF0272 protein C478_08818 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotol
hypothetical protein
sw_11_scaffold_16_14
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11736..13961
DNA (2226bp) protein (742aa)
AAA family ATPase, CDC48 subfamily protein n=2 Tax=Natrinema RepID=L9Z3R7_9EURY
AAA family ATPase, CDC48 subfamily protein {ECO:0000313|EMBL:ELY81165.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema palli
AAA family ATPase, CDC48 subfamily
sw_11_scaffold_16_15
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14641..15270
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YSU0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY76756.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_11_scaffold_16_16
unknown

Not on your lists

15278..15799
DNA (522bp) protein (174aa)

This feature has no annotations

sw_11_scaffold_16_17
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15873..16364
DNA (492bp) protein (164aa)
Pab N-terminal acetyltransferase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XUJ1_9EURY
Pab N-terminal acetyltransferase {ECO:0000313|EMBL:ELY65061.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgal
ribosomal-protein-alanine acetyltransferase
sw_11_scaffold_16_18
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16439..16876
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9UR57_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ66146.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_11_scaffold_16_19
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16869..17435
DNA (567bp) protein (189aa)
NUDIX hydrolase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7L6_HALJB
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACV11578.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain DSM 1
sw_11_scaffold_16_20
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17561..20500
DNA (2940bp) protein (980aa)
Nuclease n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HEN3_9EURY
Nuclease {ECO:0000313|EMBL:ELZ82207.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_11_scaffold_16_21
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20618..22906)
DNA (2289bp) protein (763aa)
Transglutaminase domain-containing protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z0U0_9EURY
Transglutaminase domain-containing protein {ECO:0000313|EMBL:ELY80115.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari
transglutaminase domain-containing protein
sw_11_scaffold_16_22
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22903..24039)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XH24_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY60917.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_11_scaffold_16_23
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24036..25070)
DNA (1035bp) protein (345aa)
ATPase AAA n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LLL6_9EURY
ATPase AAA {ECO:0000313|EMBL:EMA33349.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 10879.;"
ATPase
sw_11_scaffold_16_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25624..25995)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4K5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29612.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
small CPxCG-related zinc finger protein
sw_11_scaffold_16_25
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26110..27132
DNA (1023bp) protein (341aa)
ROK family protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HIH3_9EURY
ROK family protein {ECO:0000313|EMBL:ESP87724.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum t
glcK; glucose kinase
sw_11_scaffold_16_26
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27201..28709
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZFK3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59470.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_11_scaffold_16_27
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28710..29069)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Haloterrigena RepID=D2RYT9_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB61907.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_11_scaffold_16_28
unknown

Not on your lists

29702..29950
DNA (249bp) protein (83aa)

This feature has no annotations

Displaying 28 items

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