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sw_11_scaffold_20

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_20_1
unknown

Not on your lists

296..1192
DNA (897bp) protein (299aa)

This feature has no annotations

sw_11_scaffold_20_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1346..2338
DNA (993bp) protein (331aa)
Membrane lipoprotein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PH78_9EURY
hypothetical protein
Membrane lipoprotein {ECO:0000313|EMBL:ERJ05618.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ32495.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
sw_11_scaffold_20_3
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2335..3654
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NSX7_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10788.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_11_scaffold_20_4

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comp(3739..5148)
DNA (1410bp) protein (470aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=uncultured archaeon A07HB70 RepID=V4XFE8_9ARCH
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ESS06799.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
cat5; transport protein (probable substrate cationic amino acids)
sw_11_scaffold_20_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5197..5907)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PGZ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG91421.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_11_scaffold_20_6
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5976..6641)
DNA (666bp) protein (222aa)
K+ transport system, NAD-binding component n=2 Tax=Natrinema RepID=L0JRF3_NATP1
K+ transport system, NAD-binding component
K+ transport system, NAD-binding component {ECO:0000313|EMBL:AGB34105.1}; Trk-type potassium transport system, NAD-binding subunit {ECO:0000313|EMBL:ELY72181.1}; TaxID=797303 species="Archaea; Euryarc
sw_11_scaffold_20_7
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6687..8090)
DNA (1404bp) protein (468aa)
Amino acid transporter n=3 Tax=Natrinema RepID=L0JS78_NATP1
amino acid transporter
Transporter {ECO:0000313|EMBL:ELY81875.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
sw_11_scaffold_20_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8229..10184)
DNA (1956bp) protein (652aa)
dap2; dipeptidyl aminopeptidases/acylaminoacyl-peptidases id=24649668 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Dipeptidyl acylaminoacyl-peptidase {ECO:0000313|EMBL:ERH10754.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
peptidase S9
sw_11_scaffold_20_9
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10244..11287)
DNA (1044bp) protein (348aa)
Replication factor C small subunit 2 n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CHW8_9EURY
Replication factor C small subunit 2 {ECO:0000313|EMBL:ELZ21952.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena sal
Replication factor C
sw_11_scaffold_20_10
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11502..12488
DNA (987bp) protein (329aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
Probable lipoyl synthase n=2 Tax=Halobacteriales RepID=U1QHI1_9EURY
lipoate synthase
sw_11_scaffold_20_11
unknown

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12492..13178
DNA (687bp) protein (229aa)

This feature has no annotations

sw_11_scaffold_20_12
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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13281..14414
DNA (1134bp) protein (378aa)
Pyruvate dehydrogenase E1 component, alpha subunit n=1 Tax=Natronococcus occultus SP4 RepID=L0K2L2_9EURY
pyruvate dehydrogenase E1 component, alpha subunit
Pyruvate dehydrogenase E1 component, alpha subunit {ECO:0000313|EMBL:AGB39547.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natr
sw_11_scaffold_20_13
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14417..15409
DNA (993bp) protein (331aa)
Transketolase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W723_9EURY
Transketolase {ECO:0000313|EMBL:ELY45274.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens JCM 14089.;
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component subunit beta
sw_11_scaffold_20_14
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15411..17045
DNA (1635bp) protein (545aa)
dsa; dihydrolipoamide S-acyltransferase (EC:2.3.1.-)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=2 Tax=Haloferax RepID=M0I0G5_9EURY
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:ELZ90206.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="
sw_11_scaffold_20_15
unknown

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comp(17163..18995)
DNA (1833bp) protein (611aa)

This feature has no annotations

sw_11_scaffold_20_16
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19084..20559
DNA (1476bp) protein (492aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natri
Dihydrolipoyl dehydrogenase n=2 Tax=Natrinema RepID=I7CCX4_NATSJ
dihydrolipoamide dehydrogenase
sw_11_scaffold_20_17
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20685..22229
DNA (1545bp) protein (515aa)
HTR-like protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3N9_HALMT
chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:AJF27142.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_11_scaffold_20_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(22233..23615)
DNA (1383bp) protein (461aa)
Signal recognition particle 54 kDa protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NE22_9EURY
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
Signal recognition 54 kDa protein
sw_11_scaffold_20_19
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23738..23968
DNA (231bp) protein (77aa)
Peptidase M29 aminopeptidase II n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D7S1_9EURY
Leucyl aminopeptidase (Aminopeptidase T) {ECO:0000313|EMBL:ERG97566.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadrat
pepB; leucyl aminopeptidase
sw_11_scaffold_20_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24026..24574
DNA (549bp) protein (183aa)
Peptidase M29 aminopeptidase II n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5K2_9EURY
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:EMA40981.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
peptidase M29 aminopeptidase II
sw_11_scaffold_20_21
unknown

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comp(24692..24865)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_11_scaffold_20_22
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25058..26167
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D220_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ32875.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_11_scaffold_20_23
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26188..26688)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YD58_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY70863.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
sw_11_scaffold_20_24
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27348..28658)
DNA (1311bp) protein (437aa)
Major facilitator superfamily transporter n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JDE7_9EURY
Major facilitator superfamily transporter {ECO:0000313|EMBL:EMA07162.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denit
major facilitator superfamily transporter
sw_11_scaffold_20_25
unknown

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comp(28802..29002)
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 25 items

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