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sw_11_scaffold_252

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_252_1
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(62..1435)
DNA (1374bp) protein (458aa)
dihydroorotase, multifunctional complex type (EC:3.5.2.5)
Dihydroorotase, multifunctional complex type n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WZI6_9EURY
Dihydroorotase, multifunctional complex type {ECO:0000313|EMBL:ELY54880.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronoco
sw_11_scaffold_252_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1514..2107)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45503.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_11_scaffold_252_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2240..2434
DNA (195bp) protein (65aa)
30S ribosomal protein S17e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1W5_9EURY
30S ribosomal protein S17E-like protein
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
sw_11_scaffold_252_4
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2590..3333
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GLT2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ73155.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
hypothetical protein
sw_11_scaffold_252_5
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3695..4108
DNA (414bp) protein (138aa)
Plastocyanin n=1 Tax=halophilic archaeon J07HB67 RepID=U1R0M8_9EURY
Plastocyanin {ECO:0000313|EMBL:ERH13223.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
halocyanin domain protein
sw_11_scaffold_252_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4124..5740)
DNA (1617bp) protein (539aa)
trkH; Trk-type potassium transport system, permease TrkH; K03498 trk system potassium uptake protein TrkH id=24628248 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Trk-type K+ transport system, membrane component {ECO:0000313|EMBL:ERG90996.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Hal
trk-type k+ transporter, membrane component
sw_11_scaffold_252_7
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5742..7094)
DNA (1353bp) protein (451aa)
Potassium transporter peripheral membrane component n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SY68_NATMM
TrkA-N domain-containing protein
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:ELY30964.1}; TrkA-N domain protein {ECO:0000313|EMBL:ADD06039.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natr
sw_11_scaffold_252_8
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7295..7966
DNA (672bp) protein (224aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:ELZ71779.1}; EC=1.1.1.193 {ECO:0000313|EMBL:ELZ71779.1};; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales
2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase (EC:1.1.1.193)
5-amino-6-(5-phosphoribosylamino)uracil reductase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GLP3_9EURY
sw_11_scaffold_252_9
unknown

Not on your lists

8041..8496
DNA (456bp) protein (152aa)

This feature has no annotations

sw_11_scaffold_252_10
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8584..8871)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AKD5_NATGS
Uncharacterized protein {ECO:0000313|EMBL:KDE60414.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_11_scaffold_252_11
unknown

Not on your lists

comp(8893..9669)
DNA (777bp) protein (259aa)

This feature has no annotations

sw_11_scaffold_252_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9672..9869)
DNA (198bp) protein (66aa)
trxB2; thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQ62_9EURY
Thioredoxin reductase {ECO:0000313|EMBL:ELZ24517.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
sw_11_scaffold_252_13
unknown

Not on your lists

9944..10060
DNA (117bp) protein (39aa)

This feature has no annotations

sw_11_scaffold_252_14
unknown

Not on your lists

comp(10211..10522)
DNA (312bp) protein (104aa)

This feature has no annotations

sw_11_scaffold_252_15
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11139..12230)
DNA (1092bp) protein (364aa)
Thioredoxin reductase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KP23_9EURY
thioredoxin reductase
Thioredoxin reductase {ECO:0000313|EMBL:AJF27234.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_11_scaffold_252_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12562..13146)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSV2_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37442.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_11_scaffold_252_trna_1
unknown

Not on your lists

comp(13192..13266)
DNA (75bp)
transferRNA
sw_11_scaffold_252_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14177..15547
DNA (1371bp) protein (457aa)
lysine-ketoglutarate reductase/saccharopine dehydrogenase (EC:1.5.1.10)
LOR/SDH bifunctional protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NA55_9EURY
LOR/SDH bifunctional protein {ECO:0000313|EMBL:EMA53505.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
sw_11_scaffold_252_18

Not on your lists

15544..15906
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XQ81_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS04288.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_11_scaffold_252_19
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15913..16683)
DNA (771bp) protein (257aa)
ABC transporter n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WW25_9EURY
ABC transporter {ECO:0000313|EMBL:ELY52528.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus JC
ybhF; ABC-type transport protein
sw_11_scaffold_252_20
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16680..17768)
DNA (1089bp) protein (363aa)
ABC-2 type transporter n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQS4_HALUD
ABC-type transport system permease protein
ABC-type transport system permease protein {ECO:0000313|EMBL:CAP13888.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Haloba
sw_11_scaffold_252_21
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17973..19448)
DNA (1476bp) protein (492aa)
cpdB2; 2'3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
2'3'-cyclic-nucleotide 2'-phosphodiesterase n=3 Tax=Haloarcula RepID=Q5V3N0_HALMA
2'3'-cyclic-nucleotide 2'-phosphodiesterase {ECO:0000313|EMBL:EMA11948.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
sw_11_scaffold_252_22
unknown

Not on your lists

comp(19716..20765)
DNA (1050bp) protein (350aa)

This feature has no annotations

sw_11_scaffold_252_23
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21553..22179)
DNA (627bp) protein (209aa)
NmrA family protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HCP2_9EURY
NmrA family protein {ECO:0000313|EMBL:ELZ80849.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
NmrA family protein
sw_11_scaffold_252_24
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22308..22706
DNA (399bp) protein (133aa)
HxlR family transcriptional regulator n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EPW7_9EURY
HxlR family transcriptional regulator {ECO:0000313|EMBL:ELZ49113.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum corien
HxlR family transcriptional regulator
sw_11_scaffold_252_25
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23066..23212
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JWG5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37116.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_11_scaffold_252_26
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23216..23602
DNA (387bp) protein (129aa)
Transposase, IS605 OrfB family protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DVX3_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELZ39631.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum calif
transposase, IS605 OrfB family, central region
sw_11_scaffold_252_27
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23574..23939
DNA (366bp) protein (122aa)
Transposase, IS605 OrfB family protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NYA2_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EMA61515.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipol
transposase, IS605 OrfB family, central region
sw_11_scaffold_252_28
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24514..25554
DNA (1041bp) protein (347aa)
daunorubicin resistance ABC transporter ATPase subunit (EC:3.6.3.31)
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LLP0_9EURY
Daunorubicin resistance ABC transporter ATPase subunit {ECO:0000313|EMBL:EMA34431.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Ha
sw_11_scaffold_252_29

Not on your lists

25551..26447
DNA (897bp) protein (299aa)
ABC-type multidrug transport system, permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V4YJ30_9ARCH
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:ESS11392.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC-2 type transporter
Displaying items 1-30 of 35 in total

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