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sw_11_scaffold_40

Search features with annotation key words

Displaying items 31-60 of 70 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_40_30
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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17231..17881
DNA (651bp) protein (217aa)
30S ribosomal protein S5 n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CF15_9EURY
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JC
30S ribosomal protein S5
sw_11_scaffold_40_31
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17934..18398
DNA (465bp) protein (155aa)
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 id=24618904 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" s
rpl30p; 50S ribosomal protein L30P
sw_11_scaffold_40_32
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


18398..18910
DNA (513bp) protein (171aa)
50S ribosomal protein L15P n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5F4_9EURY
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailanden
rpl15; 50S ribosomal protein L15
sw_11_scaffold_40_33
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18914..20401
DNA (1488bp) protein (496aa)
Protein translocase subunit SecY n=2 Tax=Natrinema RepID=I7BWI5_NATSJ
preprotein translocase, SecY subunit
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=406552
sw_11_scaffold_40_34
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21059..21628)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JDA7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE57869.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_11_scaffold_40_35
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21625..21993)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C3S5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ16972.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_11_scaffold_40_36

Not on your lists

comp(22093..22278)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Archaea RepID=B9LVJ2_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07352.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_40_37
unknown

Not on your lists

comp(22696..23112)
DNA (417bp) protein (139aa)

This feature has no annotations

sw_11_scaffold_40_38

Not on your lists

23196..23735
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XBN8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05319.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_11_scaffold_40_39
unknown

Not on your lists

comp(23810..24175)
DNA (366bp) protein (122aa)

This feature has no annotations

sw_11_scaffold_40_40
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24651..25310
DNA (660bp) protein (220aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LQ52_HALLT
adenylate kinase
sw_11_scaffold_40_41
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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25417..26331
DNA (915bp) protein (305aa)
HTR-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZR2_9EURY
HTR-like protein {ECO:0000313|EMBL:EFW89806.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX25
hypothetical protein
sw_11_scaffold_40_42
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26432..27010
DNA (579bp) protein (193aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NPG2_HALBP
cytidylate kinase
sw_11_scaffold_40_43
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27015..27950
DNA (936bp) protein (312aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
tRNA pseudouridine 55 synthase (EC:4.2.1.70)
Probable tRNA pseudouridine synthase B n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LU96_9EURY
sw_11_scaffold_40_44
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28103..29242)
DNA (1140bp) protein (380aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3AF46_9EURY
sw_11_scaffold_40_45
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29363..30601
DNA (1239bp) protein (413aa)
Potassium channel-like protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0QSL4_HALVA
Potassium channel-like protein {ECO:0000313|EMBL:EMA08121.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismort
pchB; potassium channel-like protein
sw_11_scaffold_40_46
unknown

Not on your lists

comp(30696..31733)
DNA (1038bp) protein (346aa)

This feature has no annotations

sw_11_scaffold_40_47
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31877..32833
DNA (957bp) protein (319aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KGA2_HALAR
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:EMA19898.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Halo
hypothetical protein
sw_11_scaffold_40_48
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32833..34017
DNA (1185bp) protein (395aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LI41_9EURY
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:EMA33196.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Ha
threonine synthase
sw_11_scaffold_40_49
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34220..34924
DNA (705bp) protein (235aa)
hypothetical protein
200 kDa antigen p200, putative; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
sw_11_scaffold_40_50
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(34895..35818)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AWI5_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELZ02338.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
sw_11_scaffold_40_51
unknown

Not on your lists

comp(35909..36676)
DNA (768bp) protein (256aa)

This feature has no annotations

sw_11_scaffold_40_52
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(36673..38328)
DNA (1656bp) protein (552aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0ATE1_NATA1
putative DNA-binding protein containing a Zn-ribbon domain
sw_11_scaffold_40_53
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

38461..39414
DNA (954bp) protein (318aa)
Putative HTH-type transcriptional regulatory protein HacjB3_01485 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5A9_HALJB
XRE family transcriptional regulator
Putative HTH-type transcriptional regulatory protein HacjB3_01485 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hala
sw_11_scaffold_40_54
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(39533..39799)
DNA (267bp) protein (89aa)
Glutaredoxin n=1 Tax=Halogranum salarium B-1 RepID=J3A2M6_9EURY
Glutaredoxin {ECO:0000313|EMBL:EJN59573.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
glutaredoxin
sw_11_scaffold_40_55
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(40028..41986)
DNA (1959bp) protein (653aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00184}; Short=ThrRS {ECO:0000255|HAMAP-Rule
Threonine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYT_NATPD
sw_11_scaffold_40_56
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(42681..43229)
DNA (549bp) protein (183aa)
pyrE1; orotate phosphoribosyltransferase (EC:2.4.2.10) id=24614189 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
pyrE1; orotate phosphoribosyltransferase (EC:2.4.2.10)
sw_11_scaffold_40_57
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(43403..43969)
DNA (567bp) protein (189aa)
UPF0290 protein Hmuk_1106 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P204_HALMD
hypothetical protein
UPF0290 protein Hmuk_1106 {ECO:0000256|HAMAP-Rule:MF_01117}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
sw_11_scaffold_40_58
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

44443..45159
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WQX9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY51889.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
sw_11_scaffold_40_59
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(45160..46098)
DNA (939bp) protein (313aa)
Branched-chain amino acid aminotransferase, group I n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IDE9_HALRX
branched-chain amino acid aminotransferase, group I
Branched-chain amino acid aminotransferase, group I {ECO:0000313|EMBL:AGB16838.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Haloviv
Displaying items 31-60 of 70 in total

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