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sw_11_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 70 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_40_1
unknown

Not on your lists

comp(3..653)
DNA (651bp) protein (217aa)

This feature has no annotations

sw_11_scaffold_40_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

919..1605
DNA (687bp) protein (229aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYM9_9EURY
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:EMA49964.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
haloacid dehalogenase superfamily enzyme, subfamily IA
sw_11_scaffold_40_3
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1551..2081)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8W1_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14296.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_11_scaffold_40_4
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2086..3018)
DNA (933bp) protein (311aa)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000313|EMBL:AKH98276.1}; EC=3.5.4.27 {ECO:0000313|EMBL:AKH98276.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y4F4_9EURY
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase
sw_11_scaffold_40_5
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3138..3449)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IGM8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04452.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_11_scaffold_40_6
unknown

Not on your lists

comp(3539..3889)
DNA (351bp) protein (117aa)

This feature has no annotations

sw_11_scaffold_40_7
unknown

Not on your lists

4099..4311
DNA (213bp) protein (71aa)

This feature has no annotations

sw_11_scaffold_40_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4655..5041)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MUT9_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA49078.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_11_scaffold_40_trna_1
unknown

Not on your lists

comp(5512..5582)
DNA (71bp)
transferRNA
sw_11_scaffold_40_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5743..6570
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRR0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA35788.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_11_scaffold_40_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6634..7641
DNA (1008bp) protein (336aa)
50S ribosomal protein L3 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL3_NATPD
rpl3p; 50S ribosomal protein L3P
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_11_scaffold_40_11
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7638..8402
DNA (765bp) protein (255aa)
50S ribosomal protein L4 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6S8_HALXS
50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_11_scaffold_40_12
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8399..8656
DNA (258bp) protein (86aa)
50S ribosomal protein L23P n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X827_9EURY
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000313|EMBL:ELY57561.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;"
50S ribosomal protein L23
sw_11_scaffold_40_13
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8658..9383
DNA (726bp) protein (242aa)
50S ribosomal protein L2 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F545_9EURY
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sou
rpl2p; 50S ribosomal protein L2P
sw_11_scaffold_40_14
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


9380..9805
DNA (426bp) protein (142aa)
ribosomal protein S19/S15 id=24636019 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;
ribosomal protein S19
sw_11_scaffold_40_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


9810..10295
DNA (486bp) protein (162aa)
50S ribosomal protein L22P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MED0_9EURY
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
50S ribosomal protein L22
sw_11_scaffold_40_16
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10288..11289
DNA (1002bp) protein (334aa)
30S ribosomal protein S3 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D957_HALXS
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain
sw_11_scaffold_40_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


11286..11501
DNA (216bp) protein (72aa)
50S ribosomal protein L29P n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CL92_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
50S ribosomal protein L29
sw_11_scaffold_40_18
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11498..11872
DNA (375bp) protein (125aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754, ECO:0000313|EMBL:ELZ03295.1}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease P protein component 1 n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AXR3_9EURY
RNase P/RNase MRP subunit p29
sw_11_scaffold_40_19
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


11863..12201
DNA (339bp) protein (113aa)
rps17p; 30S ribosomal protein S17P; K02961 small subunit ribosomal protein S17 id=24636013 bin=Halorubrum_J07HR59 species=Halorubrum sp. J07HR59 genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halorubrum_J07HR59
Archaeal ribosomal protein S17P {ECO:0000313|EMBL:ERH03685.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.
rpsQ; 30S ribosomal protein S17
sw_11_scaffold_40_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


12201..12599
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL14_NATPD
rpl14p; 50S ribosomal protein L14P
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_11_scaffold_40_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


12602..12964
DNA (363bp) protein (121aa)
50S ribosomal protein L24P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUX7_9EURY
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
ribosomal protein L24p/L26e, archaeal/eukaryotic
sw_11_scaffold_40_22
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12961..13791
DNA (831bp) protein (277aa)
30S ribosomal protein S4e n=1 Tax=Halonotius sp. J07HN6 RepID=U1NT73_9EURY
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
30S ribosomal protein S4e
sw_11_scaffold_40_23
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


13784..14377
DNA (594bp) protein (198aa)
50S ribosomal protein L5 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D950_HALXS
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain
sw_11_scaffold_40_24
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14374..14574
DNA (201bp) protein (67aa)
30S ribosomal protein S14P n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WTI8_9EURY
30S ribosomal protein S14P {ECO:0000313|EMBL:ELY52511.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermo
30S ribosomal protein S14
sw_11_scaffold_40_25
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14577..14969
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C1R5_9EURY
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM
30S ribosomal protein S8
sw_11_scaffold_40_26
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14969..15505
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MRG5_9EURY
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens
50S ribosomal protein L6
sw_11_scaffold_40_27
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15505..16242
DNA (738bp) protein (246aa)
50S ribosomal protein L32e n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BD59_9EURY
50S ribosomal protein L32e {ECO:0000313|EMBL:ELZ08846.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotoleran
ribosomal protein L32E
sw_11_scaffold_40_28
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16239..16688
DNA (450bp) protein (150aa)
Ribosomal protein L19e (Fragment) n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XVS3_9EURY
Ribosomal protein L19e {ECO:0000256|RuleBase:RU000574}; Flags: Fragment;; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococc
50S ribosomal protein L19e
sw_11_scaffold_40_29
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


16689..17234
DNA (546bp) protein (182aa)
50S ribosomal protein L18P n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0AC87_9EURY
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" sourc
50S ribosomal protein L18P/L5E
Displaying items 1-30 of 70 in total

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