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sw_11_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 90 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_43_1
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..590)
DNA (588bp) protein (196aa)
UPF0173 metal-dependent hydrolase C492_12964 n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XB38_9EURY
hydrolase
UPF0173 metal-dependent hydrolase HALLA_07465 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halo
sw_11_scaffold_43_2
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

933..1202
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VVL4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY40328.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
sw_11_scaffold_43_3

Not on your lists

comp(1234..2145)
DNA (912bp) protein (304aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XDZ4_9ARCH
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ESS06199.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
nucleoside-diphosphate-sugar epimerase
sw_11_scaffold_43_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2366..2899
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3ETE1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57397.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_11_scaffold_43_5
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2978..4186)
DNA (1209bp) protein (403aa)
Transposase, IS605 OrfB family, central region n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGE1_NATGS
transposase, IS605 OrfB family, central region
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:AFZ72115.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natro
sw_11_scaffold_43_6
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4678..5841
DNA (1164bp) protein (388aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YIX0_9EURY
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ELY74059.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source=
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
sw_11_scaffold_43_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6049..6891)
DNA (843bp) protein (281aa)
Uridine phosphorylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI14_9EURY
Uridine phosphorylase {ECO:0000313|EMBL:EMA44050.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
purine or other phosphorylase 1
sw_11_scaffold_43_trna_1
unknown

Not on your lists

comp(7097..7170)
DNA (74bp)
transferRNA
sw_11_scaffold_43_8
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7216..7914)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8U2_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH38002.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_11_scaffold_43_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7993..8151)
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ24416.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_11_scaffold_43_10
unknown

Not on your lists

comp(8275..8400)
DNA (126bp) protein (42aa)

This feature has no annotations

sw_11_scaffold_43_11
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8505..10268)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LFX0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA31973.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_11_scaffold_43_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10565..11878
DNA (1314bp) protein (438aa)
Putative DHH superfamily phosphohydrolase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HBU9_9EURY
Putative DHH superfamily phosphohydrolase {ECO:0000313|EMBL:ESP87523.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
phosphohydrolase (DHH superfamily)-like protein
sw_11_scaffold_43_13
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11888..12346)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WGR3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ73143.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
sw_11_scaffold_43_14
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12429..12665)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A3Q6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY92956.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
sw_11_scaffold_43_15
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12865..13710
DNA (846bp) protein (282aa)
Uncharacterized protein n=3 Tax=Haloferax RepID=M0GRL7_HALL2
Uncharacterized protein {ECO:0000313|EMBL:ELZ88939.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717
hypothetical protein
sw_11_scaffold_43_16
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13867..17199)
DNA (3333bp) protein (1111aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MAJ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41644.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
methyl-accepting chemotaxis protein
sw_11_scaffold_43_17
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17351..18910
DNA (1560bp) protein (520aa)
Beta-lactamase domain protein {ECO:0000313|EMBL:CCQ33902.1}; mRNA 3'-end processing factor protein {ECO:0000313|EMBL:ERJ06712.1}; EC=3.1.27.- {ECO:0000313|EMBL:ERJ06712.1};; TaxID=1033806 species="Arc
Beta-lactamase domain protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGT9_9EURY
beta-lactamase domain protein
sw_11_scaffold_43_18
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18919..21462
DNA (2544bp) protein (848aa)
DEAD/H associated domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4W3_HALXS
DEAD/H associated domain-containing protein
DEAD/H associated domain protein {ECO:0000313|EMBL:AEH37590.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (str
sw_11_scaffold_43_19
unknown

Not on your lists

comp(21480..22178)
DNA (699bp) protein (233aa)

This feature has no annotations

sw_11_scaffold_43_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22287..23417
DNA (1131bp) protein (377aa)
Water Stress and Hypersensitive response domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZ88_9EURY
Water Stress and Hypersensitive response domain-containing protein {ECO:0000313|EMBL:ELZ27757.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosim
membrane protein NosY precursor
sw_11_scaffold_43_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23464..23778
DNA (315bp) protein (105aa)
Protein translocase subunit SecE n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY87_9EURY
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=797114 species="Archaea; Euryarchaeot
sec61c; preprotein translocase Sec61 subunit gamma
sw_11_scaffold_43_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


23778..24236
DNA (459bp) protein (153aa)
Transcription elongation factor Spt5 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P128_HALMD
NusG antitermination factor
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicr
sw_11_scaffold_43_23
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25004..25753
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRJ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92616.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_11_scaffold_43_24
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25779..26285)
DNA (507bp) protein (169aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BH41_9EURY
membrane protein
Membrane protein {ECO:0000313|EMBL:AHF99781.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
sw_11_scaffold_43_25
unknown

Not on your lists

26402..27370
DNA (969bp) protein (323aa)

This feature has no annotations

sw_11_scaffold_43_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27850..28878
DNA (1029bp) protein (343aa)
arsenite-activated ATPase ArsA (EC:3.6.3.16)
Arsenite-activated ATPase ArsA n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWN4_9EURY
Arsenite-activated ATPase ArsA {ECO:0000313|EMBL:ELZ27605.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
sw_11_scaffold_43_27
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29193..29981
DNA (789bp) protein (263aa)
Transposase, IS605 OrfB family protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HMP8_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELZ85033.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongan
IS1341-type transposase
sw_11_scaffold_43_28
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29923..30471
DNA (549bp) protein (183aa)
Transposase, IS605 OrfB family protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HMP8_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELZ85033.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongan
transposase, IS605 OrfB family
sw_11_scaffold_43_29
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30548..31141)
DNA (594bp) protein (198aa)
Transcription regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDJ3_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:AKH97700.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halana
putative AsnC family transcriptional regulator
Displaying items 1-30 of 90 in total

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