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sw_11_scaffold_520

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_520_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

sw_11_scaffold_520_2
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(115..903)
DNA (789bp) protein (263aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WIW5_9EURY
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ELY48288.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Na
glyoxalase/bleomycin resistance protein/dioxygenase
sw_11_scaffold_520_3
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(948..1280)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WE26_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY47760.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
sw_11_scaffold_520_4
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1357..1923)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LU24_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58218.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_11_scaffold_520_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2119..2874)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D112_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29130.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_11_scaffold_520_6
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3136..3906
DNA (771bp) protein (257aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EMC3_9EURY
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ELZ48258.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californi
minD; cell division inhibitor MinD
sw_11_scaffold_520_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3909..4529
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXK1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91004.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_11_scaffold_520_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4582..5073
DNA (492bp) protein (164aa)
folA2; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase {ECO:0000313|EMBL:CCQ35736.1}; EC=1.5.1.3 {ECO:0000313|EMBL:CCQ35736.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Dihydrofolate reductase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP40_NATM8
sw_11_scaffold_520_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5634..6446)
DNA (813bp) protein (271aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Protease HtpX homolog n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L0Q6_9EURY
heat shock protein HtpX
sw_11_scaffold_520_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6529..7392)
DNA (864bp) protein (288aa)
Nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HBW5_9EURY
Nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase {ECO:0000313|EMBL:ESP88200.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candi
nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase
sw_11_scaffold_520_11
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7551..7898
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Burkholderia pseudomallei RepID=UPI00016B0E63
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA51473.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
sw_11_scaffold_520_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8234..8644
DNA (411bp) protein (137aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=I7KXQ8_NATPD
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCI69583.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
small CPxCG-related zinc finger protein
sw_11_scaffold_520_13

Not on your lists

comp(8629..9978)
DNA (1350bp) protein (450aa)
Putative ATP-grasp enzyme n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y8K2_9ARCH
Putative ATP-grasp enzyme {ECO:0000313|EMBL:ESS07412.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
ATP-grasp protein-like protein
sw_11_scaffold_520_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10106..11215
DNA (1110bp) protein (370aa)
NMD3 family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5H4_9EURY
NMD3 family protein {ECO:0000313|EMBL:EMA40653.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
NMD protein affecting ribosome stability and mRNA decay
sw_11_scaffold_520_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11255..11650)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DIG5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34492.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_11_scaffold_520_16
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11647..12975)
DNA (1329bp) protein (443aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IGQ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04426.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_11_scaffold_520_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13121..13489
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26356.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_11_scaffold_520_18
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13656..14051
DNA (396bp) protein (132aa)
Deoxyribonuclease/rho motif-related TRAM n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y660_9EURY
Deoxyribonuclease {ECO:0000313|EMBL:KDE57407.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
SAM-dependent methyltransferase, tRNA(uracil-5)-methyltransferase
sw_11_scaffold_520_19
unknown

Not on your lists

comp(14795..15019)
DNA (225bp) protein (75aa)

This feature has no annotations

sw_11_scaffold_520_20
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15126..15611)
DNA (486bp) protein (162aa)
Type i restriction-modification system methyltransferase subunit n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7CGQ7_NATSJ
type i restriction-modification system methyltransferase subunit
Type i restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:AFO56719.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" so
sw_11_scaffold_520_21
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15745..15867)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NN42_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV11442.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_11_scaffold_520_22
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15860..16132)
DNA (273bp) protein (91aa)
Transcriptional regulator, CopG family protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0A847_9EURY
Transcriptional regulator, CopG family protein {ECO:0000313|EMBL:ELY94955.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba c
transcriptional regulator, CopG family
sw_11_scaffold_520_23
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16314..17330)
DNA (1017bp) protein (339aa)
Type I restriction-modification system methyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKV9_9EURY
type I restriction-modification system methyltransferase
Type I restriction-modification system methyltransferase {ECO:0000313|EMBL:CCQ34096.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" s
sw_11_scaffold_520_24
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17731..18366)
DNA (636bp) protein (212aa)
Trans-aconitate 2-methyltransferase protein {ECO:0000313|EMBL:ERJ04810.1}; EC=2.1.1.144 {ECO:0000313|EMBL:ERJ04810.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Trans-aconitate 2-methyltransferase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2F353_9EURY
type I restriction-modification system methyltransferase
Displaying 24 items

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