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sw_11_scaffold_17_20

Organism: SW_11_Halobacteria_69_29

partial RP 27 / 55 MC: 3 BSCG 20 / 51 MC: 1 ASCG 17 / 38
Location: 22658..24079

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 474.0
  • Bit_score: 594
  • Evalue 1.70e-166
Probable tRNA pseudouridine synthase D n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JC97_HALVA similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 474.0
  • Bit_score: 594
  • Evalue 1.20e-166
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 475.0
  • Bit_score: 587
  • Evalue 3.30e-165

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Taxonomy

Haloarcula vallismortis → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1422
ATGCGTCCTGCGCCCGCGGTCGAGCGCGCCACTGGGATCGACTGCTACGTCAGCGAGAGCGACGGCTGCGGCGGACGCCTGCGTACCGACCCCGCCGACTTCGTGGTCCGCGAGGTGGAGGCGTTCGACGCCGAGTCCGTCGACGCCGACCCCGGCTCGTACCCGCACCTCGTCGTCCGGGTCACGCTGCGGGACTGGGACACCAACGACTTCGCCCGCCGCGTCTCCGACGCGCTGAGGATGAGCCGCGAACGCGTCTCCTGGGCTGGAACGAAGGACAAGCGCGCCCACACGACACAACTGTTCAGCCTACAGGGAGTCGATCCCAGCGACGTCCCCGAGGTCGACGGGGCCGACGTCGAGGTGGTGGGGCGGGCAGGCCGTCCCGTCCTCTTCGGCGACCTCGCGGGCAACGAGTTCCGCGTGGTAGTCCGCGACCTGCGGGACGCGAGCGCCGCCGCCGCGGTGCAGCGGGAGTTAGCTGCCTTCGCCGCCTCGGGTGGCGATCCCGACCCCACCACCGTCGAGGTCGACACGGCCGCCGCCGGCGACTCGAAGCGCGACGTCGACGCCGTCGTCCCGGAGGCCGACGCCGCGGCGGTGGCCGTACCGAACTGGTTCGGCCACCAGCGGTTCGGCTCCCGGCGACCGGTGACACACGAGGTCGGCCTGGCGATCGTCCGCGGGGACTGGGAAGGGGCCGTGCGTGCGTACGTGGGCAACCCACACGAGCGCGAGCCCGAGCGCACCCGGGAGGCGCGACGGTACGTCGACGAGACGCGGGACTGGACGGGCGCTCTCGACCGGCTGCCGCGACACCTGGACCACGAGCGAGCCATCTGCTCGGCGCTCGCGGGCGTCGAGGACCCCGGACCGGCCGACTACCGCGCGGCCCTCGCGGCGGTCCCGTCGAACCTCCAGCGGTTGTTCGTCCACGCGGCGCAGTCGTACGTCTTCAACCGCGTCGTGAGCGCCAGACTCGACGGCGGCCTGCCGCTCGGACGGCCCGTCGAGGGCGACGTGGTCTGCTTCCGCGACCGCGACCTGTCCGACGCACCCGTCGCGGTGCCAGACTCCGACCGCACACAACGGGTGACCGCCGAGCGCGTCGACACCGTGCGCCGGCACTGTGAGCGGGGACGGGCGTTCGTGACGGGACCGCTCGTCGGGACCGAAACCGACCTCGCGACGGGCGAGCCCGGCAACGTGGAGCGTGCCGTCCTGGACGACCTGAACCTCGCGCCGGAGGACTTCGAGTTGCCGGGGGCGTTCGGCTCGACCGGCGACCGACGGGCGCTGCTCGTGACGACCGACCTGTGCGTGGAGCGGGAGCCGCTCGCGCTGTCGTTCGCGCTCCCGCCGGGGTCGTACGCCACCGTCCTGTTGCGGGAGTTCCTGAAGACCGACCCGCGCCGTCTGTGA
PROTEIN sequence
Length: 474
MRPAPAVERATGIDCYVSESDGCGGRLRTDPADFVVREVEAFDAESVDADPGSYPHLVVRVTLRDWDTNDFARRVSDALRMSRERVSWAGTKDKRAHTTQLFSLQGVDPSDVPEVDGADVEVVGRAGRPVLFGDLAGNEFRVVVRDLRDASAAAAVQRELAAFAASGGDPDPTTVEVDTAAAGDSKRDVDAVVPEADAAAVAVPNWFGHQRFGSRRPVTHEVGLAIVRGDWEGAVRAYVGNPHEREPERTREARRYVDETRDWTGALDRLPRHLDHERAICSALAGVEDPGPADYRAALAAVPSNLQRLFVHAAQSYVFNRVVSARLDGGLPLGRPVEGDVVCFRDRDLSDAPVAVPDSDRTQRVTAERVDTVRRHCERGRAFVTGPLVGTETDLATGEPGNVERAVLDDLNLAPEDFELPGAFGSTGDRRALLVTTDLCVEREPLALSFALPPGSYATVLLREFLKTDPRRL*