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sw_11_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 89 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_17_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(100..666)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1NYG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09245.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_17_2

Not on your lists

820..2457
DNA (1638bp) protein (546aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=uncultured prokaryote 2E01B RepID=Q2LGP5_9ZZZZ
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:ABC70148.1}; TaxID=363283 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote 2E01B.;"
sw_11_scaffold_17_3
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2501..2833)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JLT3_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB31788.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellir
sw_11_scaffold_17_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3015..3356)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P164_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV49079.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_11_scaffold_17_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3398..3535)
DNA (138bp) protein (46aa)
Uncharacterized protein {ECO:0000313|EMBL:EJN59198.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_11_scaffold_17_6

Not on your lists

comp(4237..5109)
DNA (873bp) protein (291aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta (EC:1.2.7.3)
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:AEN04621.1}; EC=1.2.7.3 {ECO:0000313|EMBL:AEN04621.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MJ72_9ARCH
sw_11_scaffold_17_7
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5106..6917)
DNA (1812bp) protein (604aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W3E2_9EURY
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein {ECO:0000313|EMBL:AGN00477.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinar
sw_11_scaffold_17_8
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7048..8229)
DNA (1182bp) protein (394aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3STX5_NATMM
alcohol dehydrogenase zinc-binding domain-containing protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADD07064.1}; Alcohol dehydrogenase zinc-binding domain-containing protein {ECO:0000313|EMBL:ELY28793.1}; TaxID=547559 species="Archa
sw_11_scaffold_17_9
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8234..9013)
DNA (780bp) protein (260aa)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608, ECO:0000313|EMBL:ELY61871.1}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608, ECO:0000313|EMBL:ELY61871.1};; TaxID=1227499 species="Archaea; Eury
GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XKB4_9EURY
sw_11_scaffold_17_10
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9270..9869
DNA (600bp) protein (200aa)
N-acetyltransferase GCN5 n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WY59_9EURY
acetyltransferase, N-acetylglutamate synthase
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:AGB39412.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronoco
sw_11_scaffold_17_11
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9955..14364)
DNA (4410bp) protein (1470aa)
ABC transporter n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9UUW3_HALBP
ABC transporter {ECO:0000313|EMBL:ELY28715.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strain
ABC transporter
sw_11_scaffold_17_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14633..16312
DNA (1680bp) protein (560aa)
mcmA1; methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:AEM56908.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AEM56908.1};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Methylmalonyl-CoA mutase, large subunit n=2 Tax=Haloarcula hispanica RepID=G0HPY9_HALHT
sw_11_scaffold_17_13
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16375..16770
DNA (396bp) protein (132aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IG60_9EURY
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:AHG04510.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. D
cupin
sw_11_scaffold_17_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16837..17283
DNA (447bp) protein (149aa)
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:ERH10526.1}; EC=5.1.99.1 {ECO:0000313|EMBL:ERH10526.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
methylmalonyl-CoA epimerase id=24649431 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
methylmalonyl-CoA epimerase
sw_11_scaffold_17_15

Not on your lists

17403..18152
DNA (750bp) protein (250aa)
Response regulator receiver protein n=1 Tax=halophilic archaeon DL31 RepID=G2MKW1_9ARCH
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEN05212.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_17_16
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18206..19591
DNA (1386bp) protein (462aa)
Geranylgeranyl reductase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W3N9_9EURY
geranylgeranyl reductase
Geranylgeranyl reductase {ECO:0000313|EMBL:AGN00647.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1
sw_11_scaffold_17_17
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19601..20911)
DNA (1311bp) protein (437aa)
indole-3-acetyl-L-aspartic acid hydrolase (EC:3.5.1.-)
Indole-3-acetyl-L-aspartic acid hydrolase {ECO:0000313|EMBL:ADE03610.1}; EC=3.5.1.- {ECO:0000313|EMBL:ADE03610.1};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferac
Indole-3-acetyl-L-aspartic acid hydrolase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GXW6_HALVD
sw_11_scaffold_17_18
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(21630..21977)
DNA (348bp) protein (116aa)
30S ribosomal protein S10 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LDU1_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000313|EMBL:EMA31756.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source
30S ribosomal protein S10
sw_11_scaffold_17_19
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22186..22611
DNA (426bp) protein (142aa)
NUDIX hydrolase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M2G3_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:EMA38585.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 10879.;"
biotin transporter BioY
sw_11_scaffold_17_20
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22658..24079
DNA (1422bp) protein (474aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JC97_HALVA
pseudouridine synthase
sw_11_scaffold_17_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24119..24853
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20225.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_11_scaffold_17_22
unknown

Not on your lists

25720..25884
DNA (165bp) protein (55aa)

This feature has no annotations

sw_11_scaffold_17_23
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25941..27425
DNA (1485bp) protein (495aa)
Metallophosphoesterase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BQL8_9EURY
Metallophosphoesterase {ECO:0000313|EMBL:ELZ13271.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.
metallophosphoesterase
sw_11_scaffold_17_24
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27422..30190
DNA (2769bp) protein (923aa)
DNA double-strand break repair Rad50 ATPase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LNQ9_9EURY
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobifo
SMC domain-containing protein
sw_11_scaffold_17_25
unknown

Not on your lists

30187..30984
DNA (798bp) protein (266aa)

This feature has no annotations

sw_11_scaffold_17_26
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30927..31295)
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:ADJ15818.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_11_scaffold_17_27
unknown

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comp(31401..31574)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_11_scaffold_17_28
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31731..33818)
DNA (2088bp) protein (696aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X8Q1_9EURY
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ELY57831.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natron
nucleic acid binding OB-fold tRNA/helicase-type
sw_11_scaffold_17_29
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

34235..34678
DNA (444bp) protein (148aa)
hypothetical protein; K06966 id=24645522 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09734.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_17_30
Aureococcus anophagefferens, Aureococcus, Pelagophyceae, Eukaryota

Not on your lists

35347..36081
DNA (735bp) protein (245aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=F0Y8S9_AURAN
Displaying items 1-30 of 89 in total

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