ggKbase home page

sw_11_scaffold_1100

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1100_1
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(129..767)
DNA (639bp) protein (213aa)
Cell division protein SepF n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBH9_HALP7
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp.
sw_11_scaffold_1100_2
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(883..1551)
DNA (669bp) protein (223aa)
Alanine racemase domain protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y9X2_HALP7
alanine racemase
Alanine racemase domain protein {ECO:0000313|EMBL:AFZ43741.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp.
sw_11_scaffold_1100_3
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1548..1820)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBA4_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ43742.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_11_scaffold_1100_4
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2024..2983)
DNA (960bp) protein (320aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YA79_HALP7
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AFZ43744.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halot
sw_11_scaffold_1100_5
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2980..3741)
DNA (762bp) protein (254aa)
succinate dehydrogenase subunit B (EC:1.3.5.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococc
Succinate dehydrogenase subunit B n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBW3_HALP7
sw_11_scaffold_1100_6
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4254..4850
DNA (597bp) protein (199aa)
TPR domain protein n=3 Tax=Arthrospira platensis RepID=D4ZUU0_ARTPN
TPR domain protein {ECO:0000313|EMBL:BAI91555.1}; TaxID=696747 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain NIES-39 /
TPR domain protein
sw_11_scaffold_1100_7

Not on your lists

5017..5679
DNA (663bp) protein (221aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN53705.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sw_11_scaffold_1100_8
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5704..6249)
DNA (546bp) protein (182aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein (EC:1.3.5.1)
Succinate dehydrogenase subunit A {ECO:0000313|EMBL:AFZ44446.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AFZ44446.1};; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chro
Succinate dehydrogenase subunit A n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBV6_HALP7
sw_11_scaffold_1100_9
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6200..7693)
DNA (1494bp) protein (498aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein (EC:1.3.5.1)
Succinate dehydrogenase subunit A {ECO:0000313|EMBL:AFZ44446.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AFZ44446.1};; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chro
Succinate dehydrogenase subunit A n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBV6_HALP7
sw_11_scaffold_1100_10
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7749..8012
DNA (264bp) protein (88aa)
MgtC/SapB transporter n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YCL9_HALP7
MgtC/SapB transporter
MgtC/SapB transporter {ECO:0000313|EMBL:AFZ44676.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain P
sw_11_scaffold_1100_11
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

10911..11702
DNA (792bp) protein (264aa)
6-deoxyerythronolide-B synthase, Phenylalanine racemase (ATP-hydrolyzing) (EC:5.1.1.11 2.3.1.94)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0003038211
Non-ribosomal peptide synthase {ECO:0000313|EMBL:KIJ75065.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;
sw_11_scaffold_1100_12
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11648..12625
DNA (978bp) protein (326aa)
Polyketide synthase family protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WUC0_9NOST
polyketide synthase family protein
Polyketide synthase family protein {ECO:0000313|EMBL:AFZ23803.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
sw_11_scaffold_1100_13
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

12698..13717
DNA (1020bp) protein (340aa)
Transcriptional regulator, AraC family n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XX02_STAC7
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AFZ36202.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PC
sw_11_scaffold_1100_14
unknown

Not on your lists

13811..13969
DNA (159bp) protein (53aa)

This feature has no annotations

sw_11_scaffold_1100_15
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14013..14582
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBN1_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ44254.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_11_scaffold_1100_16
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14792..15088)
DNA (297bp) protein (99aa)
Uncharacterized protein family (UPF0175) n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YZN1_DACSA
hypothetical protein
Uncharacterized protein family (UPF0175) {ECO:0000313|EMBL:AFZ51947.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis
sw_11_scaffold_1100_17
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(15117..15446)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000349637C
GCN5 family acetyltransferase {ECO:0000313|EMBL:KIJ83245.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
N-acetyltransferase GCN5
sw_11_scaffold_1100_18
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15643..15996)
DNA (354bp) protein (118aa)
Transposase IS200-family protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YER2_HALP7
transposase IS200-family protein
Transposase IS200-family protein {ECO:0000313|EMBL:AFZ44573.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp
sw_11_scaffold_1100_19
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16050..17429
DNA (1380bp) protein (460aa)
Transposase, IS605 OrfB family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YCI2_HALP7
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AFZ44574.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp.
Displaying 19 items

View Taxonomy