ggKbase home page

sw_11_scaffold_354

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_354_1
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2..247
DNA (246bp) protein (82aa)
Rod shape-determining protein RodA n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YD43_HALP7
rod shape-determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:AFZ44871.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece
sw_11_scaffold_354_2
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

398..946
DNA (549bp) protein (183aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YWK8_DACSA
DnaJ-class molecular chaperone with C-terminal Zn finger domain
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:AFZ51306.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" s
sw_11_scaffold_354_3
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

943..1215
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YFJ9_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ44873.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_11_scaffold_354_4
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1265..1858
DNA (594bp) protein (198aa)
Putative membrane protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YWM0_DACSA
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFZ51304.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 830
sw_11_scaffold_354_5
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2092..3357
DNA (1266bp) protein (422aa)
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=65093 species="Bacteria; Cyano
Acetylornithine aminotransferase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YE80_HALP7
sw_11_scaffold_354_6
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3491..4066)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YFR0_HALP7
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFZ45215.1}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Ha
sw_11_scaffold_354_7
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4135..4317
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YPX9_DACSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ48986.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.
sw_11_scaffold_354_8
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4329..4649)
DNA (321bp) protein (107aa)
Response regulator receiver protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YGM2_HALP7
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AFZ45213.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece
sw_11_scaffold_354_9
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4765..5400)
DNA (636bp) protein (212aa)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YWV4_DACSA
phosphoribosyl-ATP pyrophosphohydrolase
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales;
sw_11_scaffold_354_10
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(5749..6222)
DNA (474bp) protein (158aa)
type 11 methyltransferase Tax=GWC2_Nitrospirae_56_14_curated
Methyltransferase type 11 id=4824970 bin=GWC2_Nitrospirae-rel_56_14 species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
sw_11_scaffold_354_11
unknown

Not on your lists

comp(6310..6438)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_11_scaffold_354_12
Drosophila pseudoobscura, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

6560..7906
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3ICD8_STRPU
GA11808 {ECO:0000313|EMBL:EAL25702.2}; TaxID=46245 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroi
TonB family protein
sw_11_scaffold_354_13
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8022..8540
DNA (519bp) protein (173aa)
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YDW6_HALP7
sw_11_scaffold_354_14
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8566..9318)
DNA (753bp) protein (251aa)
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cl
Serine acetyltransferase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBP1_HALP7
sw_11_scaffold_354_15
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9414..9581
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YUK3_DACSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ49778.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.
sw_11_scaffold_354_trna_1
unknown

Not on your lists

comp(9601..9689)
DNA (89bp)
transferRNA
sw_11_scaffold_354_16
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9744..10541)
DNA (798bp) protein (266aa)
NCAIR mutase-like protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YVZ4_DACSA
NCAIR mutase-like protein
NCAIR mutase-like protein {ECO:0000313|EMBL:AFZ50263.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 830
sw_11_scaffold_354_17
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10581..12341)
DNA (1761bp) protein (587aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YTQ3_DACSA
dipeptide ABC transporter substrate-binding protein
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:AFZ50264.1}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylo
sw_11_scaffold_354_18
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12360..13268)
DNA (909bp) protein (303aa)
Metallophosphoesterase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YDW8_HALP7
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AFZ44268.1}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Hal
sw_11_scaffold_354_19
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13408..14622)
DNA (1215bp) protein (405aa)
Transposase, IS605 OrfB family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YH36_HALP7
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AFZ45680.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp.
sw_11_scaffold_354_20
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14797..15570
DNA (774bp) protein (258aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBP5_HALP7
sw_11_scaffold_354_21
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15567..16229
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBD9_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ44271.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_11_scaffold_354_22
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16333..16815)
DNA (483bp) protein (161aa)
Hydrogenase maturation protease n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBT9_HALP7
hydrogenase maturation protease
Hydrogenase maturation protease {ECO:0000313|EMBL:AFZ44314.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp.
sw_11_scaffold_354_23
unknown

Not on your lists

17113..17475
DNA (363bp) protein (121aa)

This feature has no annotations

sw_11_scaffold_354_24
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17536..20553)
DNA (3018bp) protein (1006aa)
Exonuclease SbcC n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YTA6_DACSA
exonuclease SbcC
Exonuclease SbcC {ECO:0000313|EMBL:AFZ49707.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.;"
Displaying 25 items

View Taxonomy