ggKbase home page

sw_11_scaffold_865

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_865_1
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2..133
DNA (132bp) protein (44aa)
Photosystem II D2 protein {ECO:0000256|HAMAP-Rule:MF_01383}; Short=PSII D2 protein {ECO:0000256|HAMAP-Rule:MF_01383};; EC=1.10.3.9 {ECO:0000256|HAMAP-Rule:MF_01383};; Photosystem Q(A) protein {ECO:000
Photosystem II D2 protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YQD9_DACSA
Photosystem II DII subunit, Q(A) protein
sw_11_scaffold_865_2
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

117..884
DNA (768bp) protein (256aa)
Photosystem II 44 kDa subunit reaction center protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YEM1_HALP7
photosystem II 44 kDa subunit reaction center protein
Photosystem II CP43 reaction center protein {ECO:0000256|HAMAP-Rule:MF_01496}; PSII 43 kDa protein {ECO:0000256|HAMAP-Rule:MF_01496}; Protein CP-43 {ECO:0000256|HAMAP-Rule:MF_01496}; Flags: Precursor;
sw_11_scaffold_865_3
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

922..1500
DNA (579bp) protein (193aa)
Photosystem II 44 kDa subunit reaction center protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YEM1_HALP7
photosystem II 44 kDa subunit reaction center protein
Photosystem II CP43 reaction center protein {ECO:0000256|HAMAP-Rule:MF_01496}; PSII 43 kDa protein {ECO:0000256|HAMAP-Rule:MF_01496}; Protein CP-43 {ECO:0000256|HAMAP-Rule:MF_01496}; Flags: Precursor;
sw_11_scaffold_865_4
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1953..3059)
DNA (1107bp) protein (369aa)
Conserved domain protein, putative n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VIJ2_9CYAN
Conserved domain protein, putative {ECO:0000313|EMBL:EDX78240.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chth
hypothetical protein
sw_11_scaffold_865_5
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3072..3848)
DNA (777bp) protein (259aa)
Putative membrane protein (DUF2232) n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YRV3_DACSA
hypothetical protein rbh
Putative membrane protein (DUF2232) {ECO:0000313|EMBL:AFZ49207.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis sali
sw_11_scaffold_865_6
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3967..4692)
DNA (726bp) protein (242aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y982_HALP7
CarD family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AFZ42643.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Hal
sw_11_scaffold_865_7
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4800..5660)
DNA (861bp) protein (287aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YQN0_DACSA
branched-chain amino acid ABC transporter permease
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:AFZ49209.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcop
sw_11_scaffold_865_8
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5773..6168
DNA (396bp) protein (132aa)
Mannose-6-phosphate isomerase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YQM3_DACSA
mannose-6-phosphate isomerase
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:AFZ49211.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC
sw_11_scaffold_865_9
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6180..6866
DNA (687bp) protein (229aa)
PspA/IM30 family protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y6U8_HALP7
PspA/IM30 family protein
PspA/IM30 family protein {ECO:0000313|EMBL:AFZ42646.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strai
sw_11_scaffold_865_10
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6954..7847)
DNA (894bp) protein (298aa)
ATP synthase gamma chain n=2 Tax=Chroococcales RepID=K9Y6W0_HALP7
ATP synthase F1 subcomplex subunit gamma
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=6509
sw_11_scaffold_865_11
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8022..9539)
DNA (1518bp) protein (506aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase subunit alpha n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YYN8_DACSA
proton translocating ATP synthase, F1 subunit alpha
sw_11_scaffold_865_12
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9564..10127)
DNA (564bp) protein (188aa)
ATP synthase subunit delta n=2 Tax=Chroococcales RepID=K9Y756_HALP7
ATP synthase F1 subcomplex subunit delta
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
sw_11_scaffold_865_13
Aphanothece halophytica, Aphanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10124..10315)
DNA (192bp) protein (64aa)
ATP synthase subunit b n=2 Tax=Chroococcales RepID=K9Y992_HALP7
H+transporting two-sector ATPase subunit B/B'
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
sw_11_scaffold_865_14
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10278..10568)
DNA (291bp) protein (97aa)
ATP synthase subunit b n=2 Tax=Chroococcales RepID=K9Y992_HALP7
H+transporting two-sector ATPase subunit B/B'
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
sw_11_scaffold_865_15
Aphanothece halophytica, Aphanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10683..11198)
DNA (516bp) protein (172aa)
ATP synthase F0 subcomplex B' subunit n=2 Tax=Chroococcales RepID=K9Y827_HALP7
ATP synthase F0 subcomplex B' subunit
ATP synthase subunit b {ECO:0000256|RuleBase:RU003849}; TaxID=72020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanothece.;" source="Aphanothece halophytica.;"
sw_11_scaffold_865_16
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11258..11503)
DNA (246bp) protein (82aa)
ATP synthase F0 subcomplex C subunit n=2 Tax=Chroococcales RepID=K9Y6V3_HALP7
ATP synthase F0 subcomplex subunit C
ATP synthase F0 subcomplex C subunit {ECO:0000313|EMBL:AFZ42651.1}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.
sw_11_scaffold_865_17
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11633..12379)
DNA (747bp) protein (249aa)
ATP synthase subunit a n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YYP2_DACSA
F0F1-type ATP synthase subunit alpha rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
sw_11_scaffold_865_18
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12433..12903)
DNA (471bp) protein (157aa)
ApH+ATPase I subunit n=2 Tax=Chroococcales RepID=F2Z9N5_APHHA
ATP synthase protein I
Putative ATP synthase protein I {ECO:0000313|EMBL:AFZ42649.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp.
sw_11_scaffold_865_19
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13065..14267)
DNA (1203bp) protein (401aa)
Methyltransferase family protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YS60_DACSA
methyltransferase family protein
Methyltransferase family protein {ECO:0000313|EMBL:AFZ49342.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina
sw_11_scaffold_865_20
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

14333..14905
DNA (573bp) protein (191aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XYP4_STAC7
Endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AFZ37149.1}; Flags: Precursor;; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strai
sw_11_scaffold_865_21
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15021..15503
DNA (483bp) protein (161aa)
Transposase, IS605 OrfB family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y6B6_HALP7
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AFZ42339.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp.
sw_11_scaffold_865_22
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15875..18145
DNA (2271bp) protein (757aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halot
ATP-dependent DNA helicase, Rep family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YAB6_HALP7
ATP-dependent DNA helicase, Rep family
sw_11_scaffold_865_23
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18445..18534
DNA (90bp) protein (30aa)
Photosystem I reaction center subunit XII {ECO:0000256|HAMAP-Rule:MF_00828}; PSI-M {ECO:0000256|HAMAP-Rule:MF_00828}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophyci
sw_11_scaffold_865_24
unknown

Not on your lists

comp(18619..18834)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_11_scaffold_865_25
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(18779..21829)
DNA (3051bp) protein (1017aa)
V8-like Glu-specific endopeptidase n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RMX4_9CYAN
V8-like Glu-specific endopeptidase
V8-like Glu-specific endopeptidase {ECO:0000313|EMBL:AFY58654.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
sw_11_scaffold_865_26
unknown

Not on your lists

comp(21996..22076)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 26 items

View Taxonomy