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sw_11_scaffold_1025

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1025_1
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

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1..516
DNA (516bp) protein (172aa)
Uncharacterized protein id=4254322 bin=GWF2_Bacteroidetes_29_10 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_29_8_curated
hypothetical protein
sw_11_scaffold_1025_2
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(529..1584)
DNA (1056bp) protein (352aa)
dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TNN7_MARTH
sw_11_scaffold_1025_3
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2078..3160)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CE0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD00732.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii
sw_11_scaffold_1025_4
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3340..5256
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L1Y3_SAPGL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC23520.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (st
sw_11_scaffold_1025_5
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5406..8009
DNA (2604bp) protein (868aa)
INTEGRAL MEMBRANE PROTEIN (Rhomboid family) n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WH51_9SPIO
UPF0182 protein D770_00605 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flamm
INTEGRAL MEMBRANE PROTEIN (Rhomboid family)
sw_11_scaffold_1025_6
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

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comp(8285..8908)
DNA (624bp) protein (208aa)
hypothetical protein AtheD1_08475 id=2034919 bin=GWE2_Bacteroidetes_29_8 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_29_8_curated
hypothetical protein
sw_11_scaffold_1025_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9291..10763)
DNA (1473bp) protein (491aa)
RNA polymerase, sigma 54 subunit, RpoN n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK09_CHIPD
RNA polymerase sigma-54 subunit RpoN
RNA polymerase, sigma 54 subunit, RpoN {ECO:0000313|EMBL:ACU58350.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chi
sw_11_scaffold_1025_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11063..11764
DNA (702bp) protein (234aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC
Asparagine--tRNA ligase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIN8_RHOM4
asparaginyl-tRNA synthetase
Displaying 8 items

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