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sw_11_scaffold_1280

Search features with annotation key words

Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1280_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..196)
DNA (195bp) protein (65aa)
Transposase IS4 family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAE4_CHIPD
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ACU61613.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophag
sw_11_scaffold_1280_2
Cellulophaga algicola, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

313..1128
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XBB3_CELAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV49977.1}; Flags: Precursor;; TaxID=688270 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Ce
sw_11_scaffold_1280_3
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1230..1466
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BV28_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM84500.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 =
hypothetical protein
sw_11_scaffold_1280_4
Synechococcus elongatus, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1466..1819
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034C8810
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB56564.1}; TaxID=1140 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus elongatus (strain PCC 7
sw_11_scaffold_1280_5
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1952..2710
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGP2_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43659.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviic
sw_11_scaffold_1280_6
unknown

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2782..3324
DNA (543bp) protein (181aa)

This feature has no annotations

sw_11_scaffold_1280_7
unknown

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3787..4773
DNA (987bp) protein (329aa)

This feature has no annotations

sw_11_scaffold_1280_8
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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4877..5662
DNA (786bp) protein (262aa)
Pollen allergen Poa pIX/Phl pVI, C-terminal id=2933331 bin=GWF2_Bacteroidetes_33_38 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
ErfK/YbiS/YcfS/YnhG family protein Tax=GWF2_Bacteroidetes_33_38_curated
ErfK/YbiS/YcfS/YnhG family protein
sw_11_scaffold_1280_9
unknown

Not on your lists

5700..6431
DNA (732bp) protein (244aa)

This feature has no annotations

sw_11_scaffold_1280_10
Bacteroides sp. CAG:927, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6523..6972)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B4457
Tyrosine type site-specific recombinase {ECO:0000313|EMBL:CCX48345.1}; TaxID=1262753 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;"
Site-specific recombinase XerD
sw_11_scaffold_1280_11
unknown

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comp(7098..7340)
DNA (243bp) protein (81aa)

This feature has no annotations

sw_11_scaffold_1280_12
GWA2_Bacteroidetes_32_17, GWA2_Bacteroidetes_32_17, GWA2_Bacteroidetes_32_17, GWA2_Bacteroidetes_32_17, Bacteroidetes, Bacteria

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7420..7704
DNA (285bp) protein (95aa)
Putative uncharacterized protein id=4991704 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Putative uncharacterized protein id=4991704 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
sw_11_scaffold_1280_13
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7903..9975
DNA (2073bp) protein (691aa)
Putative uncharacterized protein id=4905521 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
collagen triple helix repeat domain-containing protein Tax=GWA2_Bacteroidetes_32_17_curated
sw_11_scaffold_1280_14
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

Not on your lists

10010..10495
DNA (486bp) protein (162aa)
Putative uncharacterized protein id=4991704 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein Tax=RifOxyB12_full_OP3_50_7_curated
sw_11_scaffold_1280_15
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10802..10954
DNA (153bp) protein (51aa)
recombinase RecR n=1 Tax=Pedobacter agri RepID=UPI00029A8E3A
Recombination protein recR; K06187 recombination protein RecR Tax=GWF2_Bacteroidetes_38_335_curated
recR; recombination protein RecR
Displaying 15 items

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