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sw_11_scaffold_1947

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Displaying 9 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1947_1
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..624
DNA (624bp) protein (208aa)
sdhA; succinate dehydrogenase (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:AGY52638.1}; EC=1.3.99.1 {ECO:0000313|EMBL:AGY52638.1};; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" so
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Bacteroidales bacterium CF RepID=U5Q2N1_9BACT
sw_11_scaffold_1947_2
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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801..1553
DNA (753bp) protein (251aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENY5_RUNSL
succinate dehydrogenase and fumarate reductase iron-sulfur protein
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:AEI51043.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" sou
sw_11_scaffold_1947_3
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1749..2204)
DNA (456bp) protein (152aa)
chemotaxis protein CheY n=1 Tax=Geovibrio thiophilus RepID=UPI0003B3B9E4
rcp; response regulator rcp1
rcp; response regulator rcp1 Tax=GWA2_Gallionellales_60_18_curated
sw_11_scaffold_1947_4
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2201..3679)
DNA (1479bp) protein (493aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DDX9_HALXS
PAS/PAC sensor signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEH39234.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopig
sw_11_scaffold_1947_5
Cyanothece sp. CCY0110, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3681..6914)
DNA (3234bp) protein (1078aa)
Serine/threonine kinase with two-component sensor domain n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IRJ7_9CHRO
Serine/threonine kinase with two-component sensor domain {ECO:0000313|EMBL:EAZ90846.1}; TaxID=391612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyano
PAS domain S-box
sw_11_scaffold_1947_6
unknown

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comp(7046..7906)
DNA (861bp) protein (287aa)

This feature has no annotations

sw_11_scaffold_1947_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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8075..9004
DNA (930bp) protein (310aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4); K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase id=2981866 bin=GWF2_Ignavibacteria_35_20 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
sw_11_scaffold_1947_8
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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9115..9339
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003731D84
hypothetical protein Tax=GWA2_Bacteroidetes_32_17_curated
hypothetical protein
sw_11_scaffold_1947_9
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

9386..10336
DNA (951bp) protein (317aa)
aldehyde dehydrogenase (acceptor) (EC:1.2.99.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
Betaine-aldehyde dehydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2M3_SORCE
betaine-aldehyde dehydrogenase
Displaying 9 items

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