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sw_11_scaffold_348

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_348_1
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..533)
DNA (531bp) protein (177aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphin
Aconitate hydratase 1 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CDZ5_SPHS2
aconitate hydratase 1
sw_11_scaffold_348_2
unknown

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576..1091
DNA (516bp) protein (172aa)

This feature has no annotations

sw_11_scaffold_348_3
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1546..2604
DNA (1059bp) protein (353aa)
Saccharopine dehydrogenase n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L2Z1_SAPGL
saccharopine dehydrogenase
Saccharopine dehydrogenase {ECO:0000313|EMBL:AFC23718.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis
sw_11_scaffold_348_4
Loa loa, Loa, Spirurida, Chromadorea, Nematoda, Metazoa

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comp(2698..3297)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Loa loa RepID=E1FLZ1_LOALO
Uncharacterized protein {ECO:0000313|EMBL:EFO26575.2}; TaxID=7209 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Loa.;" source="Loa loa (Eye worm
hypothetical protein
sw_11_scaffold_348_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3370..4266)
DNA (897bp) protein (299aa)
Purine or other phosphorylase family 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFY6_NIAKG
purine or other phosphorylase family 1
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:AEW00585.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niaste
sw_11_scaffold_348_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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4321..5202
DNA (882bp) protein (294aa)
universal stress protein UspA-like protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
universal stress protein id=3978873 bin=GWF2_Bacteroidetes_33_16 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
universal stress protein
sw_11_scaffold_348_7
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5297..7435)
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R3C8_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV31949.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenwe
sw_11_scaffold_348_8
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7462..7917)
DNA (456bp) protein (152aa)
Uncharacterized protein family UPF0029, Impact, N-terminal n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EDY1_RUNSL
hypothetical protein
Uncharacterized protein family UPF0029, Impact, N-terminal {ECO:0000313|EMBL:AEI48522.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Run
sw_11_scaffold_348_9
Nonlabens sediminis, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8092..8961)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XM83_LEEBM
Integral membrane protein {ECO:0000313|EMBL:GAK97423.1}; TaxID=319236 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens sediminis.;"
membrane protein containing DUF6
sw_11_scaffold_348_10
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9004..10173)
DNA (1170bp) protein (390aa)
aminotransferase class i and ii; K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=GWA2_Bacteroidetes_31_9_curated
Aminotransferase class I and II id=4383233 bin=GWF2_Bacteroidetes_43_11 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
aspartate aminotransferase
sw_11_scaffold_348_11
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(10401..10859)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N621_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ97078.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
sw_11_scaffold_348_12
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11053..13431
DNA (2379bp) protein (793aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUW5_SOLCM
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit {ECO:0000313|EMBL:AFD07665.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
sw_11_scaffold_348_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(13827..15020)
DNA (1194bp) protein (398aa)
Uncharacterized protein id=4310724 bin=GWF2_Bacteroidetes_40_13 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
ATPase AAA; K07133 Tax=GWE2_Bacteroidetes_40_63_curated
ATPase AAA
sw_11_scaffold_348_14
unknown

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comp(15052..15189)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 14 items

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