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sw_11_scaffold_350

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_350_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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1..264
DNA (264bp) protein (88aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
CHU large protein id=4337643 bin=GWF2_Bacteroidetes_35_48 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
PKD domain-containing protein
sw_11_scaffold_350_2
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

499..1506
DNA (1008bp) protein (336aa)
OmpA/MotB domain protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TL61_MARTH
Cell envelope biogenesis protein OmpA {ECO:0000313|EMBL:GAL86496.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga my
ompa/motb domain protein
sw_11_scaffold_350_3
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1890..2414
DNA (525bp) protein (175aa)
Sec-independent protein translocase protein TatC n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DWT1_9BACT
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter al
Sec-independent protein translocase component
sw_11_scaffold_350_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2570..2818
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AE5C6
RpiB/LacA/LacB family sugar-phosphate isomerase {ECO:0000313|EMBL:EKN15686.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source=
ribose 5-phosphate isomerase B
sw_11_scaffold_350_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2958..4337
DNA (1380bp) protein (460aa)
iron-sulfur cluster binding protein n=1 Tax=Segetibacter koreensis RepID=UPI00037061D2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58430.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
sw_11_scaffold_350_6
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4411..5502)
DNA (1092bp) protein (364aa)
Glu/Leu/Phe/Val dehydrogenase n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LM55_9BACT
Glu/Leu/Phe/Val dehydrogenase {ECO:0000313|EMBL:EJF10503.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
amino acid dehydrogenase
sw_11_scaffold_350_7
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6081..6461
DNA (381bp) protein (127aa)
Arginase family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VHR3_9SPHI
arginase
Arginase family protein {ECO:0000313|EMBL:EFK59615.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
sw_11_scaffold_350_8
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

6419..7279
DNA (861bp) protein (287aa)
arginase family hydrolase Tax=CG_Bacteroid_01
Arginase/agmatinase/formiminoglutamase id=1968027 bin=GWE2_Bacteroidetes_29_8 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
arginase
sw_11_scaffold_350_9
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7283..8593)
DNA (1311bp) protein (437aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacterii
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KXX4_HALH1
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
sw_11_scaffold_350_10
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8674..10149)
DNA (1476bp) protein (492aa)
Gliding motility protein {ECO:0000313|EMBL:KGE88972.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactyli
gliding motility-associated lipoprotein GldJ id=4081561 bin=GWF2_Bacteroidetes_43_63 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
sulfatase-modifying factor protein
sw_11_scaffold_350_11
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10206..11213)
DNA (1008bp) protein (336aa)
Putative membrane protein id=2703494 bin=GWF2_Bacteroidetes_41_31 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
membrane protein
Tax=BJP_08E140C01_Bacteriodales_41_10
sw_11_scaffold_350_12
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11264..15190
DNA (3927bp) protein (1309aa)
hypothetical protein Tax=GWF2_Bacteroidetes_38_335_curated
Putative uncharacterized protein id=4245394 bin=GWF2_Bacteroidetes_38_335 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
sw_11_scaffold_350_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15222..16418
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNY4_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58681.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
sw_11_scaffold_350_14
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16563..17045
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000371C4A6
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
sw_11_scaffold_350_15
unknown

Not on your lists

18060..18251
DNA (192bp) protein (64aa)

This feature has no annotations

sw_11_scaffold_350_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18610..19305
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHJ5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43760.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (stra
sw_11_scaffold_350_17
unknown

Not on your lists

19298..19813
DNA (516bp) protein (172aa)

This feature has no annotations

sw_11_scaffold_350_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19788..20840
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHJ7_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43762.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (stra
sw_11_scaffold_350_19
unknown

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comp(21788..22702)
DNA (915bp) protein (305aa)

This feature has no annotations

sw_11_scaffold_350_20
unknown

Not on your lists

comp(22645..22881)
DNA (237bp) protein (79aa)

This feature has no annotations

sw_11_scaffold_350_21
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23033..25081)
DNA (2049bp) protein (683aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD (EC:3.5.1.28) Tax=GWF2_Bacteroidetes_33_38_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD id=4646868 bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Displaying 21 items

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