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sw_11_scaffold_428

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_428_1
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1..486)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES42_AMOA5
DNA topoisomerase IV subunit B
Uncharacterized protein {ECO:0000313|EMBL:ACE06044.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiatic
sw_11_scaffold_428_2
unknown

Not on your lists

974..1675
DNA (702bp) protein (234aa)

This feature has no annotations

sw_11_scaffold_428_3
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

1841..2494
DNA (654bp) protein (218aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
ABC transporter related protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S840_PEDSD
ABC transporter
sw_11_scaffold_428_4
R_OD1_Nomurabacteria_41_52b, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2537..4171
DNA (1635bp) protein (545aa)
TMTC4; transmembrane and tetratricopeptide repeat containing 4 Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_41_52b_curated
Conserved hypothetical tpr repeat protein id=4838807 bin=GWC2_OD1_43_27 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
sw_11_scaffold_428_5
unknown

Not on your lists

4666..5028
DNA (363bp) protein (121aa)

This feature has no annotations

sw_11_scaffold_428_6
Pelodictyon phaeoclathratiforme, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

5356..5538
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SCG5_PELPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF42745.1}; TaxID=324925 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyo
sw_11_scaffold_428_7
unknown

Not on your lists

5691..6038
DNA (348bp) protein (116aa)

This feature has no annotations

sw_11_scaffold_428_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6185..8611
DNA (2427bp) protein (809aa)
ligand-gated channel n=1 Tax=Salisaeta longa RepID=UPI0003B68C06
hypothetical protein
Putative outer membrane receptor protein {ECO:0000313|EMBL:ABC45319.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_11_scaffold_428_9
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

8961..9560
DNA (600bp) protein (200aa)
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
putative lipoprotein id=4533038 bin=GWF2_Bacteroidetes_33_38 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
outer membrane assembly lipoprotein YfiO
sw_11_scaffold_428_10
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9557..9925
DNA (369bp) protein (123aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9b_curated
Putative uncharacterized protein id=2170023 bin=GWB2_Bacteroidetes_32_14 species=Prevotella sp. oral taxon 299 genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
DNA-directed RNA polymerase subunit omega
sw_11_scaffold_428_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9928..10464
DNA (537bp) protein (179aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y043_9SPHI
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:EHQ27952.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingo
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
sw_11_scaffold_428_12
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

10472..11026
DNA (555bp) protein (185aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSQ1_SOLCM
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:KIF31900.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
sw_11_scaffold_428_13
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

11019..11933
DNA (915bp) protein (305aa)
Putative uncharacterized protein id=1812776 bin=GWE2_Bacteroidetes_29_8 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_29_8_curated
hypothetical protein
sw_11_scaffold_428_14
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

11963..13618
DNA (1656bp) protein (552aa)
DNA repair protein RecN n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y045_9SPHI
DNA repair protein RecN Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
DNA replication and repair protein RecN
sw_11_scaffold_428_15
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13667..14503
DNA (837bp) protein (279aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyt
enoyl-ACP reductase n=1 Tax=Rudanella lutea RepID=UPI00037AFD17
enoyl-ACP reductase
sw_11_scaffold_428_16
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14609..15199)
DNA (591bp) protein (197aa)
ATP-dependent Clp protease, ATP-binding subunit (Fragment) n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V8B9_9BACT
Clp protease ClpC
ATP-dependent Clp protease, ATP-binding subunit {ECO:0000313|EMBL:EJF10377.1}; Flags: Fragment;; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;"
sw_11_scaffold_428_17
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17835..18245
DNA (411bp) protein (137aa)
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQQ9_SOLCM
anti-anti-sigma regulatory factor
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) {ECO:0000313|EMBL:AFD06930.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriac
sw_11_scaffold_428_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18250..18693
DNA (444bp) protein (148aa)
Ribonuclease Z; K00784 ribonuclease Z [EC:3.1.26.11] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MSM2_9SPHI
Displaying 18 items

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