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sw_11_scaffold_438

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_438_1
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..838)
DNA (837bp) protein (279aa)
molecular chaperone GroEL n=1 Tax=Segetibacter koreensis RepID=UPI000366B2C7
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1220578 spec
groEL; molecular chaperone GroEL
sw_11_scaffold_438_2
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(894..1178)
DNA (285bp) protein (95aa)
molecular chaperone GroES n=1 Tax=Flexithrix dorotheae RepID=UPI0003758855
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1629721 spec
chaperonin GroES
sw_11_scaffold_438_3
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1560..2273
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000363372C
Uncharacterized protein {ECO:0000313|EMBL:GAL83089.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
sw_11_scaffold_438_4
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2353..2769)
DNA (417bp) protein (139aa)
Preprotein translocase, SecG subunit id=4145227 bin=GWF2_Bacteroidetes_42_66 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
preprotein translocase, SecG subunit; K03075 preprotein translocase subunit SecG Tax=GWE2_Bacteroidetes_42_39_curated
preprotein translocase, SecG subunit
sw_11_scaffold_438_5
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2776..3777)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029AB1C3
Uncharacterized protein {ECO:0000313|EMBL:GAO28028.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.
hypothetical protein
sw_11_scaffold_438_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

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comp(3780..4280)
DNA (501bp) protein (167aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
Putative uncharacterized protein id=3680979 bin=GWF2_Bacteroidetes_35_48 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
sw_11_scaffold_438_7
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4311..5579)
DNA (1269bp) protein (423aa)
ATPase AAA n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HSD3_9SPHI
ATPase AAA {ECO:0000313|EMBL:ERJ58422.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucim
ATPase AAA
sw_11_scaffold_438_8
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5674..7146)
DNA (1473bp) protein (491aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FXJ7_ECHVK
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
sw_11_scaffold_438_9
unknown

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7383..7808
DNA (426bp) protein (142aa)

This feature has no annotations

sw_11_scaffold_438_10
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8018..8911
DNA (894bp) protein (298aa)
Uncharacterized protein id=4221063 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
two-component sensor histidine kinase Tax=GWA2_Bacteroidetes_32_17_curated
histidine kinase
sw_11_scaffold_438_11
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8911..9132
DNA (222bp) protein (74aa)
Integral membrane sensor signal transduction histidine kinase id=4204349 bin=GWF2_Bacteroidetes_38_335 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
integral membrane sensor signal transduction histidine kinase Tax=GWF2_Bacteroidetes_38_335_curated
integral membrane sensor signal transduction histidine kinase
sw_11_scaffold_438_12
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9132..9566
DNA (435bp) protein (145aa)
Outer membrane receptor protein id=2201158 bin=GWB2_Bacteroidetes_32_14 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
outer membrane receptor protein; K02014 iron complex outermembrane recepter protein Tax=GWD2_Bacteroidetes_33_33_curated
susC33; TonB dependent/ligand-gated channel
Displaying 12 items

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