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sw_11_scaffold_509

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_509_1
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2..658)
DNA (657bp) protein (219aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiri
Pseudouridine synthase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7MXY3_9BACT
pseudouridine synthase family protein
sw_11_scaffold_509_2
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(699..998)
DNA (300bp) protein (100aa)
S-(hydroxymethyl)glutathione dehydrogenase n=1 Tax=Echinicola pacifica RepID=UPI00036BD349
segregation and condensation protein B
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vie
sw_11_scaffold_509_3
unknown

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comp(1103..1279)
DNA (177bp) protein (59aa)

This feature has no annotations

sw_11_scaffold_509_4
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1318..2121)
DNA (804bp) protein (268aa)
Glycosyl transferase group 1 id=3130339 bin=GWF2_Bacteroidetes_43_63 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
group 1 glycosyl transferase
Tax=BJP_08E140C01_Bacteriodales_41_10
sw_11_scaffold_509_5
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(2118..2432)
DNA (315bp) protein (105aa)
Glycosyl transferase group 1 id=3130339 bin=GWF2_Bacteroidetes_43_63 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
group 1 glycosyl transferase Tax=GWF2_Bacteroidetes_43_63_curated
capsular polysaccharide biosynthesis protein
sw_11_scaffold_509_6
unknown

Not on your lists

2928..3299
DNA (372bp) protein (124aa)

This feature has no annotations

sw_11_scaffold_509_7
unknown

Not on your lists

3305..3538
DNA (234bp) protein (78aa)

This feature has no annotations

sw_11_scaffold_509_8
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3734..4639)
DNA (906bp) protein (302aa)
Putative MccF-like protein (Microcin C7 resistance) n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R065_OWEHD
putative MccF-like protein (microcin C7 resistance) Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
putative MccF-like protein (microcin C7 resistance)
sw_11_scaffold_509_9
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


4837..6297
DNA (1461bp) protein (487aa)
Methionine--tRNA ligase id=2301101 bin=GWB2_Bacteroidetes_32_14 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
hypothetical protein Tax=GWD2_Bacteroidetes_33_33_curated
methionyl-tRNA synthetase
sw_11_scaffold_509_10
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6291..6791
DNA (501bp) protein (167aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=2 Tax=Bacteroides RepID=R7KE31_9BACE
Suspect SCG annotation. See neighboring gene [sw_11_scaffold_509_9].
sw_11_scaffold_509_11
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

6869..8128
DNA (1260bp) protein (420aa)
Carboxylesterase type B n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICT0_FLUTR
Carboxylesterase type B Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Carboxylesterase type B
sw_11_scaffold_509_trna_1
unknown

Not on your lists

8209..8281
DNA (73bp)
transferRNA
sw_11_scaffold_509_12
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8766..9593
DNA (828bp) protein (276aa)
CRISPR-associated protein Cas6 Tax=GWF2_Bacteroidetes_35_48_curated
CRISPR-associated protein Cas6 id=4115721 bin=GWF2_Bacteroidetes_41_31 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
cas6; CRISPR-associated endoribonuclease Cas6
sw_11_scaffold_509_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9728..10111
DNA (384bp) protein (128aa)
HIRAN protein n=2 Tax=Rhodothermus marinus RepID=D0MEY6_RHOM4
HIRAN domain-containing protein
HIRAN protein {ECO:0000313|EMBL:ACY47436.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strai
sw_11_scaffold_509_14
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

10338..10982
DNA (645bp) protein (215aa)
Putative transcriptional regulator n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHF7_ALIFI
transcriptional regulator
Tax=BJP_IG2103_Bacteroidetes_37_22
sw_11_scaffold_509_15
Lewinella cohaerens, Lewinella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10979..11215
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037D889F
sw_11_scaffold_509_16
unknown

Not on your lists

11324..11524
DNA (201bp) protein (67aa)

This feature has no annotations

sw_11_scaffold_509_17
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11586..11816
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Cyanothece RepID=B7JXW4_CYAP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ56904.1}; TaxID=423472 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Crocosphaera.;" source="Crocosphaera watsonii WH 0005.;"
sw_11_scaffold_509_18
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12466..13197
DNA (732bp) protein (244aa)
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:GAF02865.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fer
CRISPR-associated protein, Cas5p family id=4115718 bin=GWF2_Bacteroidetes_41_31 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
CRISPR-associated protein, Cas5p family
sw_11_scaffold_509_19
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13202..14788
DNA (1587bp) protein (529aa)
CRISPR-associated protein, Csp2 family n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UK06_TANFA
CRISPR-associated protein, Csp2 family {ECO:0000313|EMBL:BAR49590.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella f
CRISPR-associated protein, Csp2 family
sw_11_scaffold_509_20
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

14814..15806
DNA (993bp) protein (331aa)
CRISPR-associated protein, Csp1 family id=4115716 bin=GWF2_Bacteroidetes_41_31 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
csp1; CRISPR-associated protein, Csp1 family
Tax=BJP_IG2102_Bacteroidetes_40_9
sw_11_scaffold_509_21
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15745..18060
DNA (2316bp) protein (772aa)
cas3; CRISPR-associated helicase Cas3; K07012 Tax=GWF2_Bacteroidetes_41_31_curated
CRISPR-associated helicase Cas3 id=4115715 bin=GWF2_Bacteroidetes_41_31 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
cas3; CRISPR-associated helicase Cas3
sw_11_scaffold_509_22
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18300..19412
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-M08 RepID=UPI00037A3150
Uncharacterized protein {ECO:0000313|EMBL:KIF26807.1}; Flags: Fragment;; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montan
ATPase
sw_11_scaffold_509_23
Cloacimonetes bacterium SCGC AAA252-M08, Cloacimonetes, Bacteria

Not on your lists

19551..20087
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-M08 RepID=UPI00037E4887
sw_11_scaffold_509_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20228..20749
DNA (522bp) protein (174aa)
CRISPR-associated exonuclease, Cas4 family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQ73_NIAKG
CRISPR-associated exonuclease, Cas4 family
CRISPR-associated exonuclease, Cas4 family {ECO:0000313|EMBL:AEW01074.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
sw_11_scaffold_509_25

Not on your lists

20950..21351
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GL45_THISH
Marine sediment metagenome DNA, contig: S06H3_L05832 {ECO:0000313|EMBL:GAI09585.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
sw_11_scaffold_509_26
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21557..22561
DNA (1005bp) protein (335aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphy
CRISPR-associated protein Cas1 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037CBBB2
cas1; CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype
sw_11_scaffold_509_27
Plasmodium ovale, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

22578..22838
DNA (261bp) protein (87aa)
Tryptophan-rich antigen (Fragment) n=1 Tax=Plasmodium ovale curtisi RepID=U5N286_9APIC
Tryptophan-rich antigen {ECO:0000313|EMBL:AGX85298.1}; Flags: Fragment;; TaxID=864141 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plas
hypothetical protein
sw_11_scaffold_509_28
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

22845..23108
DNA (264bp) protein (88aa)
CRISPR-associated protein Cas2 n=1 Tax=Anaerophaga thermohalophila RepID=UPI00038284D1
CRISPR-associated protein Cas2
Tax=BJP_IG2102_Bacteroidetes_40_9
Displaying 29 items

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