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sw_11_scaffold_628

Search features with annotation key words

Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_628_1
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..928
DNA (927bp) protein (309aa)
Trigger factor n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAS9_9SPHI
Trigger factor {ECO:0000313|EMBL:EHQ29538.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter pal
trigger factor
sw_11_scaffold_628_2
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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906..1610
DNA (705bp) protein (235aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit id=1943287 bin=GWE2_Bacteroidetes_32_14 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
sw_11_scaffold_628_3
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1613..2845
DNA (1233bp) protein (411aa)
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcal
ATP-dependent protease ATP-binding subunit ClpX id=4706688 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
endopeptidase Clp ATP-binding regulatory subunit ClpX
sw_11_scaffold_628_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3024..3602)
DNA (579bp) protein (193aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KS35_SOLCM
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KIC89791.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihu
sw_11_scaffold_628_5
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3710..4324)
DNA (615bp) protein (205aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z216_BELBD
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
sw_11_scaffold_628_6
unknown

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comp(4305..4829)
DNA (525bp) protein (175aa)

This feature has no annotations

sw_11_scaffold_628_7
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4911..5999
DNA (1089bp) protein (363aa)
ilvE; branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacter
Branched-chain-amino-acid aminotransferase n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L476_SAPGL
sw_11_scaffold_628_8
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6248..6772
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MWA4_9SPHI
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:AIM38890.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphi
sw_11_scaffold_628_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6777..7598
DNA (822bp) protein (274aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI6_NIAKG
ABC transporter periplasmic protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEV97409.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niast
sw_11_scaffold_628_10
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7588..8379
DNA (792bp) protein (264aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R5Y1_OWEHD
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJS06411.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.
dipeptide ABC transporter periplasmic protein
sw_11_scaffold_628_11
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8620..9138
DNA (519bp) protein (173aa)
fabD; malonyl CoA-ACP transacylase (EC:2.3.1.39)
malonyl CoA-acyl carrier protein transacylase id=3892725 bin=GWF2_Bacteroidetes_33_38 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
malonyl CoA-acyl carrier protein transacylase Tax=GWF2_Bacteroidetes_33_38_curated
Displaying 11 items

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