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sw_11_scaffold_2156_2

Organism: SW_11_Bacteroidetes_45_7

near complete RP 48 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: comp(1469..3568)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 663.0
  • Bit_score: 1099
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 663.0
  • Bit_score: 1099
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 663.0
  • Bit_score: 1099
  • Evalue 0.0

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2100
ATGCAAGGGAGTATTAACAGTATTTCCGGGCGTCTTGTGATGTGGTCCATATTCTTTTTCTTCAATAACACTACAGAACTTACCCAGCAACCCCAGCAGCGATATAATTTTGGCAAAATAGCGAAAAACGTTGAGTATCCGGATCTTCTAAGCATACAAATCCAATCATTTCAAAATTTCTTTCAATTAGAAACTTCTCCCGAAGAAAGAAGTGACGAAGGACTCTATAAGGTATTTACGGAGAATTTTCCTATTACAGACGCGAGGAACATCTTCGTTCTGGAATTTCTGGATTATTTTGTCGATCCTCCCCGCTACACAATCGATGAATGTGTGGAGCGAGGCTTAACCTACAGCGTGCCTCTCAAAGCAAAGCTTCGTCTATCCTGTAATGATGAGGAACACGTAGACTTTGAAACCATTGAACAAGATGTGTTTTTAGGGAATATTCCCTACATGACACCTAAGGGAACATTTGTTATTAATGGTGCTGAGCGCCTTGTTGTTACTCAATTGCATCGCTCACCCGGCGTATTTTTTGGTCAAAGTGTCCATCCTAATGGCACTAAGATCTATTCAGCACGTGTGATCCCATTTAAGGGAGCATGGATGGAGTTTGCCACGGATATCAATAATGTGATGTACGCCTACATCGACCGAAAGAAAAAATTCCCGGTTACTACGCTCTTGCGCGCTATCGGCTATGATTCTGACAGGAAAATTCTTTCACTTTTTGAACTTGCCGATGAAGTCAAAGTCAACAAAACCAACCGAAATAAGCTCAAAGACAGGAAGTTAGCAGCAAGAGTACTCAAGAGCTGGAACGAGGACTTCGTTGATGAGGATACCGGTGAAGTTGTCACGATTGAACGCAATGAGGTCATTCTTGAACGCGATACTGTTCTCGATGAAGAAGCTATTAAGAAAATCGAAGAAACTGGTGTAGAAACGGTTATTCTTCAGAAAGAAGACCTTTCACAGGATTATTCTATCATTTACAATACCCTTCAGAAAGACAGCTCTAATTCCGAATTGGAAGCTGTTCAGCACATCTATCGACAGCTTCGTGGCTCTGAAGCACCTGACGAAGAAACGGCAAGGGGGATCATCGACAAGTTATTCCTTTCCGATAAGCGCTACGATCTTGGCGATGTGGGTCGTTACAAGATCAATAAAAAGCTGGGCGTAGAAGTTGACATCGATACCAGGACATTGACAAAAGACGATATGATTTCTATCGTTAAATACCTGGTCAAGCTTAGCAATGATAAAGCTGAGATCGATGATATTGACCATTTGAGTAACAGGCGCGTCAAAACTGTTGGTGAGCAGCTATATCAACAGTTCGGTGTTGGCTTGTCAAGAATGGCTCGTACCATCAGGGAAAGGATGAACGTAAGGGACAATGAAGTGTTTACACCTGTTGACTTGATCAATGCACGTACCCTTTCATCCGTGATCAACTCTTTCTTTGGCACCAGCCAATTGTCCCAATTCATGGATCAGACGAATCCACTTTCCGAAATAACACACAAGAGAAGAATTTCGGCACTTGGTCCCGGAGGCCTTTCCAGGGAGCGTGCCGGCTTTGAAGTCCGTGACGTTCACTATTCCCACTACGGCCGTCTTTGTACCATTGAGACACCGGAAGGACCCAACATTGGCCTGATTTCAACGCTATGTGTTCACGCTAAGGTTAACAGGTTGGGTTTTATTGAGACGCCCTACAGGCAGGTAAACAACGGAAAAGTTGACTTTGTCAATAACATAGAATATTTATCAGCTGAAGAAGAGGATCAACATACAATTGCCCAGTCCAACGCCCCAGTAGACGAAGACGGACATTTTCTTAACGACAGGATTAAAGGGCGCTCAGCAGGCGATTTCCCCATCCTTGCTCCCGATGAAGTTGATTACATGGATGTTGCACCGAACCAGATTGTTGGTGTATCCGCCTCATTGATTCCATTCCTGGAAAACGATGATGCCAACCGCGCATTGATGGGGTCAAACATGCAGCGGCAGGCAGTTCCTTTGATGAATCCTGAAGCCCCGATTGTAGGCACCGGACTTGAATTCACGTGCTCAAATTACCGCTGA
PROTEIN sequence
Length: 700
MQGSINSISGRLVMWSIFFFFNNTTELTQQPQQRYNFGKIAKNVEYPDLLSIQIQSFQNFFQLETSPEERSDEGLYKVFTENFPITDARNIFVLEFLDYFVDPPRYTIDECVERGLTYSVPLKAKLRLSCNDEEHVDFETIEQDVFLGNIPYMTPKGTFVINGAERLVVTQLHRSPGVFFGQSVHPNGTKIYSARVIPFKGAWMEFATDINNVMYAYIDRKKKFPVTTLLRAIGYDSDRKILSLFELADEVKVNKTNRNKLKDRKLAARVLKSWNEDFVDEDTGEVVTIERNEVILERDTVLDEEAIKKIEETGVETVILQKEDLSQDYSIIYNTLQKDSSNSELEAVQHIYRQLRGSEAPDEETARGIIDKLFLSDKRYDLGDVGRYKINKKLGVEVDIDTRTLTKDDMISIVKYLVKLSNDKAEIDDIDHLSNRRVKTVGEQLYQQFGVGLSRMARTIRERMNVRDNEVFTPVDLINARTLSSVINSFFGTSQLSQFMDQTNPLSEITHKRRISALGPGGLSRERAGFEVRDVHYSHYGRLCTIETPEGPNIGLISTLCVHAKVNRLGFIETPYRQVNNGKVDFVNNIEYLSAEEEDQHTIAQSNAPVDEDGHFLNDRIKGRSAGDFPILAPDEVDYMDVAPNQIVGVSASLIPFLENDDANRALMGSNMQRQAVPLMNPEAPIVGTGLEFTCSNYR*