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sw_11_scaffold_2156

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_2156_1
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..1497)
DNA (1497bp) protein (499aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG6_CHIPD
DNA-directed RNA polymerase subunit beta
sw_11_scaffold_2156_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1469..3568)
DNA (2100bp) protein (700aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG6_CHIPD
DNA-directed RNA polymerase subunit beta
sw_11_scaffold_2156_3
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3791..4174)
DNA (384bp) protein (128aa)
50S ribosomal protein L7 n=1 Tax=Anaerophaga thermohalophila RepID=UPI000319B3D8
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000255|HAMAP-Rule:MF_00368}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forseti
sw_11_scaffold_2156_4
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4209..4745)
DNA (537bp) protein (179aa)
50S ribosomal protein L10 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9Y6_FLUTR
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
50S ribosomal protein L10
sw_11_scaffold_2156_5
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4816..5514)
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L452_SAPGL
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandi
sw_11_scaffold_2156_6
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5548..6012)
DNA (465bp) protein (155aa)
50S ribosomal protein L11 n=1 Tax=Rudanella lutea RepID=UPI000365D882
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Halisco
sw_11_scaffold_2156_7
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6015..6584)
DNA (570bp) protein (190aa)
Transcription antitermination protein nusG id=2594500 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
transcription termination/antitermination factor NusG; K02601 transcriptional antiterminator NusG Tax=GWF2_Bacteroidetes_38_335_curated
antitermination protein NusG
sw_11_scaffold_2156_trna_1
unknown

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comp(6823..6895)
DNA (73bp)
transferRNA
sw_11_scaffold_2156_8
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6910..7488)
DNA (579bp) protein (193aa)
tufA; translation elongation factor 1a (ef-1a/ef-tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L448_SAPGL
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia;
Displaying 9 items

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