ggKbase home page

sw_11_scaffold_578_20

Organism: SW_11_Bacteroidetes_45_7

near complete RP 48 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: comp(20983..22248)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit id=3883909 bin=GWF2_Bacteroidetes_33_16 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 423.0
  • Bit_score: 401
  • Evalue 1.40e-108
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=GWE2_Bacteroidetes_32_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 423.0
  • Bit_score: 401
  • Evalue 1.90e-108
efflux transporter, rnd family, mfp subunit similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 420.0
  • Bit_score: 391
  • Evalue 2.30e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Bacteroidetes_32_14_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1266
ATGAATAAAAATAAAATCATCATTGGCCTTGGCATATTGGCTCTGGTTCTCGTTGTGCTTGCCGTTGTTGGTAAAAATCGTGGGTGGATTGGAAGTGAGGATGGCGTGAAAGTCACAACAGAACAGGTAACAAACCGCACTATTATTGAACGTGTGGCGGCCAGTGGCAAAATCTTTCCTGAGGTTGAGGTCAAGATAAGCCCCGATGTATCTGGCGAGATCGTTGAATTAACCGTACAAGAGGGCGATTCCGTCAACAAAGGCGATCACTTGGTCTCCATTCGACCGGATGTGTATAATACGATGGTTGACAGGGCGGAGGCCTCTCTCAACCAGGCACGTGCTCAGCTTGCAAGCTCCAAGTCCCGCTTAACCGAAGTAAAAGCCAGACTTAAAAACGTTAAGCAAAATTATAAACGCCAAAAGAAGCTTCACGAGCAGGGTGTAATATCGGATGCAGAGTTTGAAAAAGCTGAGACTGAATACGAGACTGTAAAAGCGAATAAGGAATCTGCTGAACAAAAGGTACAAGCTGCCAAATTTAGTGTAAGGAGCGCTCAGGCCAATCTGGATGAAGCTCGCGAGAATTTGGAAAAGACGTCAATTTCATCCCCAATGGAAGGGATCATTTCACGCTTGAATGTAGAAGAGGGTGAGCGCGTAGTGGGTACTGATCAAATGGCTGGTACTGAGATCCTGAGAGTTGCGGAGTTTAACAATATGGAGGTGCGCGTTAACGTGAGTGAGAACGATATTCTGCGTGTAAGTGAGAATGATACCGCTTATATTGAAGTCGATGCCTATCCTGAAAGAGAGTTCAAGGGAATCGTCAACCAGATTGCCAACTCGGCTAACATCAGTGCTGAAGAGCAACTGACATCGGATCAGGTAACCAACTTTACTGTGGAGATTCGCATCCTGCGGTCATCCTATAAGGATCTGATGAACAGGGCAGGGAAGCAATTTCCCTTCCGCCCCGGCATGTCAGCATCTGTGGAAATTGAAACCGATAAACGAGAGGGTGTTGTGTCTGTCCCTATTCAATCTGTCACCATAAAAGAGCAAGTGACAGGTGATCAAGAACAAGGAGGCAGTGCTTCCGGATCTTCTGAACAAGTTCAGGAAGTGGTATTTCTTCATCAGGCCGATACAGTTGCTATCCATGAAGTAGAAACAGGTATTCAGGACGATGAGTATATCGAGATTAAGTCTGGCTTGAGTGACGGGCAAGACGTTGTCGTAAATTCAAGAGCGGCAGTAATGTGA
PROTEIN sequence
Length: 422
MNKNKIIIGLGILALVLVVLAVVGKNRGWIGSEDGVKVTTEQVTNRTIIERVAASGKIFPEVEVKISPDVSGEIVELTVQEGDSVNKGDHLVSIRPDVYNTMVDRAEASLNQARAQLASSKSRLTEVKARLKNVKQNYKRQKKLHEQGVISDAEFEKAETEYETVKANKESAEQKVQAAKFSVRSAQANLDEARENLEKTSISSPMEGIISRLNVEEGERVVGTDQMAGTEILRVAEFNNMEVRVNVSENDILRVSENDTAYIEVDAYPEREFKGIVNQIANSANISAEEQLTSDQVTNFTVEIRILRSSYKDLMNRAGKQFPFRPGMSASVEIETDKREGVVSVPIQSVTIKEQVTGDQEQGGSASGSSEQVQEVVFLHQADTVAIHEVETGIQDDEYIEIKSGLSDGQDVVVNSRAAVM*