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sw_11_scaffold_134

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_134_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..521)
DNA (519bp) protein (173aa)
DNA polymerase beta domain protein region n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EK18_RUNSL
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AEI49425.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis
sw_11_scaffold_134_2
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(540..1319)
DNA (780bp) protein (260aa)
DNA polymerase beta domain protein region n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UE33_9CYAN
DNA polymerase beta domain protein region {ECO:0000313|EMBL:EGK89371.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vagin
DNA polymerase beta domain-containing protein
sw_11_scaffold_134_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1391..2344)
DNA (954bp) protein (318aa)
Ppx/GppA phosphatase family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7B6_SALRM
Ppx/GppA phosphatase family protein
Ppx/GppA phosphatase family {ECO:0000313|EMBL:CBH23921.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_11_scaffold_134_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2675..3517)
DNA (843bp) protein (281aa)
prmA; 50S ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-] id=24657695 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosomal protein L11 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00735}; Short=L11 Mtase {ECO:0000255|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00735};; TaxID=309807 species="Bact
prmA; 50S ribosomal protein L11 methyltransferase
sw_11_scaffold_134_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3677..4447)
DNA (771bp) protein (257aa)
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] id=24657696 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase ubiE
sw_11_scaffold_134_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4558..5541)
DNA (984bp) protein (328aa)
pfkA; 6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11] id=24657697 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:
pfkA; 6-phosphofructokinase
sw_11_scaffold_134_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5594..6541)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4C0_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44882.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_134_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6581..7267)
DNA (687bp) protein (229aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7C2_SALRM
aat; leucyl/phenylalanyl-tRNA--protein transferase
sw_11_scaffold_134_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7461..7976
DNA (516bp) protein (172aa)
Pyruvate carboxylase {ECO:0000313|EMBL:CBH23928.1}; EC=6.4.1.1 {ECO:0000313|EMBL:CBH23928.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
Pyruvate carboxylase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7C3_SALRM
pyc; pyruvate carboxylase
sw_11_scaffold_134_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8137..9132
DNA (996bp) protein (332aa)
dfrA; dihydroflavonol 4-reductase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] id=24657701 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
dfrA; dihydroflavonol 4-reductase
Dihydroflavonol 4-reductase {ECO:0000313|EMBL:ABC44668.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_11_scaffold_134_11
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9267..9665
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HVB1_CYAP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL44563.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC
sw_11_scaffold_134_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10172..11851
DNA (1680bp) protein (560aa)
hypothetical protein
hypothetical protein id=24658463 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25659.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_134_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11908..13269
DNA (1362bp) protein (454aa)
hypothetical protein
hypothetical protein id=24658462 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25658.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_134_14
unknown

Not on your lists

13447..13983
DNA (537bp) protein (179aa)

This feature has no annotations

sw_11_scaffold_134_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14229..15314)
DNA (1086bp) protein (362aa)
pyridoxal-dependent decarboxylase
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:CBH23941.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
tyrosine decarboxylase id=24657711 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_11_scaffold_134_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15552..16550)
DNA (999bp) protein (333aa)
Pyridoxal-dependent decarboxylase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7D6_SALRM
pyridoxal-dependent decarboxylase
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:CBH23941.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
sw_11_scaffold_134_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16642..16812)
DNA (171bp) protein (57aa)
Plasmid stabilization system n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHP5_RHOMR
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:AEN73361.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
Displaying 17 items

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