ggKbase home page

sw_11_scaffold_2738

Search features with annotation key words

Displaying 10 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_2738_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1..237
DNA (237bp) protein (79aa)
hypothetical protein
hypothetical protein; K09748 ribosome maturation factor RimP id=24659740 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
sw_11_scaffold_2738_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

304..1950
DNA (1647bp) protein (549aa)
Transcription factor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA56_SALRM
nusA; transcription factor
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_11_scaffold_2738_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1972..2997
DNA (1026bp) protein (342aa)
Translation initiation factor IF-2 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=IF2_SALRD
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_11_scaffold_2738_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3006..4742
DNA (1737bp) protein (579aa)
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
infB; translation initiation factor IF-2
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 id=24659738 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_11_scaffold_2738_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4816..5211
DNA (396bp) protein (132aa)
rbfA; ribosome-binding factor A
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A id=24659737 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000313|EMBL:CBH24909.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_11_scaffold_2738_6
unknown

Not on your lists

5519..5608
DNA (90bp) protein (30aa)

This feature has no annotations

sw_11_scaffold_2738_7
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

5568..5837
DNA (270bp) protein (90aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.-); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RBG_13_Chloroflexi_56_8_curated
tRNA pseudouridine synthase B n=1 Tax=Salisaeta longa RepID=UPI0003B743E4
tRNA pseudouridine synthase B
sw_11_scaffold_2738_8
unknown

Not on your lists

comp(5747..6070)
DNA (324bp) protein (108aa)

This feature has no annotations

sw_11_scaffold_2738_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6080..6820
DNA (741bp) protein (247aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=309807 species="Bacteria; Bacteroidete
ribF; riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] id=24659736 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ribF; riboflavin biosynthesis protein RibF
sw_11_scaffold_2738_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


6951..7118
DNA (168bp) protein (56aa)
rpsO; 30S ribosomal protein S15
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 id=24659735 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
Displaying 10 items

View Taxonomy