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sw_11_scaffold_405

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_405_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..295
DNA (294bp) protein (98aa)
mreC; Rod shape-determining protein MreC
mreC; Rod shape-determining protein MreC; K03570 rod shape-determining protein MreC id=24659600 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
sw_11_scaffold_405_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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446..1009
DNA (564bp) protein (188aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=309807 specie
ATP-dependent protease subunit HslV n=2 Tax=Salinibacter ruber RepID=Q2S219_SALRD
hslV; ATP-dependent protease hslV
sw_11_scaffold_405_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1096..2184
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9R1_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24766.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_405_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2256..3674
DNA (1419bp) protein (473aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S217_SALRD
hslU; ATP-dependent protease ATP-binding subunit HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=309807 species="Bacteria; Bacteroid
sw_11_scaffold_405_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3678..4034
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9R3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24768.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_405_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4311..5165)
DNA (855bp) protein (285aa)
hypothetical protein
hypothetical protein id=24659605 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43713.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_405_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5286..5837)
DNA (552bp) protein (184aa)
paaY; carbonic anhydrase
paaY; carbonic anhydrase id=24659606 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Carbonic anhydrase {ECO:0000313|EMBL:ABC44856.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_11_scaffold_405_8

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comp(5831..6166)
DNA (336bp) protein (112aa)
Marine sediment metagenome DNA, contig: S03H2_S16390 {ECO:0000313|EMBL:GAH62049.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
sw_11_scaffold_405_9
Caldithrix abyssi, Caldithrix, Bacteria

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6581..8230
DNA (1650bp) protein (550aa)
thioredoxin n=1 Tax=Salisaeta longa RepID=UPI0003B63734
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EHO39748.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13
hypothetical protein
sw_11_scaffold_405_trna_1
unknown

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comp(8322..8394)
DNA (73bp)
transferRNA
sw_11_scaffold_405_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8462..9139)
DNA (678bp) protein (226aa)
DedA family protein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S212_SALRD
dedA; DedA family protein
DedA family protein, putative {ECO:0000313|EMBL:ABC45367.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_11_scaffold_405_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(9172..9645)
DNA (474bp) protein (158aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase; K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] id=24659609 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ispF; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00107}; Short=MECDP-synthase {ECO:0000255|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000255|HAMAP-Rule:MF_00107}
sw_11_scaffold_405_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9675..10373)
DNA (699bp) protein (233aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] id=24659610 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
sw_11_scaffold_405_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10456..11505)
DNA (1050bp) protein (350aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] id=24659611 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
sw_11_scaffold_405_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11654..12529)
DNA (876bp) protein (292aa)
hypothetical protein
hypothetical protein id=24659612 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45691.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 15 items

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