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sw_11_scaffold_1403

Search features with annotation key words

Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1403_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..717
DNA (717bp) protein (239aa)
mviN; integral membrane protein MviN
mviN; integral membrane protein MviN; K03980 virulence factor id=24657346 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Integral membrane protein MviN {ECO:0000313|EMBL:ABC46112.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_11_scaffold_1403_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

865..1431
DNA (567bp) protein (189aa)
hypothetical protein
hypothetical protein; K07735 putative transcriptional regulator id=24657347 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UPF0301 protein SRM_00577 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_11_scaffold_1403_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1725..2375
DNA (651bp) protein (217aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit
NADH-quinone oxidoreductase subunit I n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H644_SALRM
nuoI; NADH dehydrogenase I, I subunit
sw_11_scaffold_1403_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2516..3067
DNA (552bp) protein (184aa)
hypothetical protein id=24657349 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23500.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_1403_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3511..4116
DNA (606bp) protein (202aa)
holA; DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] id=24657350 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA polymerase III delta subunit {ECO:0000313|EMBL:CBH23501.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH23501.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
holA; DNA polymerase III subunit delta
sw_11_scaffold_1403_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4394..5029
DNA (636bp) protein (212aa)
hypothetical protein
hypothetical protein id=24657351 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45371.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_1403_trna_1
unknown

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5120..5193
DNA (74bp)
transferRNA
sw_11_scaffold_1403_7
unknown

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comp(5510..5725)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_11_scaffold_1403_8
unknown

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comp(6012..6263)
DNA (252bp) protein (84aa)

This feature has no annotations

sw_11_scaffold_1403_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6578..7012
DNA (435bp) protein (145aa)
etp; Low molecular weight protein-tyrosine-phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48] id=24657353 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:CBH23504.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CBH23504.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
etp; Low molecular weight protein-tyrosine-phosphatase
sw_11_scaffold_1403_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7080..8495
DNA (1416bp) protein (472aa)
amidohydrolase
amidohydrolase id=24658394 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Amidohydrolase family {ECO:0000313|EMBL:ABC46086.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_11_scaffold_1403_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8622..8876)
DNA (255bp) protein (85aa)
hypothetical protein
hypothetical protein id=24657354 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45274.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_1403_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9195..9983)
DNA (789bp) protein (263aa)
Putative RNA methyltransferase n=2 Tax=Salinibacter ruber RepID=Q2S583_SALRD
spoU; RNA methyltransferase
Putative RNA methyltransferase {ECO:0000313|EMBL:ABC45823.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_11_scaffold_1403_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10186..11490
DNA (1305bp) protein (435aa)
gdhA; glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=24657356 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
gdhA; glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185, ECO:0000313|EMBL:CBH23507.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
sw_11_scaffold_1403_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11755..13623
DNA (1869bp) protein (623aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45011.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24657357 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_11_scaffold_1403_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13595..15157
DNA (1563bp) protein (521aa)
Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Nicotinamide nucleotide repair protein; Includes:; ADP-dependent (S)-NAD(P)H-hydrate dehydratase; EC=4.2.1.136;; ADP-dependent NAD(P)HX dehydratase; Inc
sugar kinase
sugar kinase id=24657358 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_11_scaffold_1403_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15243..15665
DNA (423bp) protein (141aa)
hypothetical protein
hypothetical protein id=24657359 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23510.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_1403_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15851..16510
DNA (660bp) protein (220aa)
tonB; TonB protein; K03832 periplasmic protein TonB id=24657360 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tonB; TonB protein
TonB protein {ECO:0000313|EMBL:CBH23511.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M
sw_11_scaffold_1403_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16651..17283)
DNA (633bp) protein (211aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
Ribose-5-phosphate isomerase A n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H657_SALRM
rpiA; ribose 5-phosphate isomerase
sw_11_scaffold_1403_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17416..17580)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H658_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23513.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 20 items

View Taxonomy
NameRatio
Salinibacter ruber
85.00%
unknown
15.00%
Salinibacter ruber: 0.85unknown: 0.15Salinibacter ruberunknown