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sw_11_scaffold_197

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_197_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..333)
DNA (333bp) protein (111aa)
Lipoprotein-releasing system ATP-binding protein lolD n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4F3_SALRD
lipoprotein-releasing system ATP-binding protein lolD
ABC transporter {ECO:0000313|EMBL:CBH23891.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strai
sw_11_scaffold_197_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

483..4004
DNA (3522bp) protein (1174aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rho
DNA polymerase n=1 Tax=Salisaeta longa RepID=UPI0003B70171
DNA polymerase B region
sw_11_scaffold_197_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4066..4335
DNA (270bp) protein (90aa)
hypothetical protein
hypothetical protein id=24657925 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25135.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_197_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4453..4713
DNA (261bp) protein (87aa)
hypothetical protein id=24657926 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25136.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_197_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4756..6252
DNA (1497bp) protein (499aa)
Pantothenate permease n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S124_SALRD
panF; pantothenate permease
Pantothenate permease {ECO:0000313|EMBL:ABC45148.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_11_scaffold_197_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6347..6652
DNA (306bp) protein (102aa)
hypothetical protein
hypothetical protein id=24657928 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45989.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_197_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6810..7310
DNA (501bp) protein (167aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45989.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24657928 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_11_scaffold_197_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7426..7998)
DNA (573bp) protein (191aa)
ppa; inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1] id=24657929 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=309807 species="Bac
ppa; inorganic pyrophosphatase
sw_11_scaffold_197_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8188..8859)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAT4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25139.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_197_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8973..9950)
DNA (978bp) protein (326aa)
hypothetical protein
hypothetical protein id=24657931 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25140.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_197_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10149..11009)
DNA (861bp) protein (287aa)
NAD dependent epimerase/dehydratase family
NAD dependent epimerase/dehydratase family id=24657932 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NAD dependent epimerase/dehydratase family {ECO:0000313|EMBL:CBH25141.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
sw_11_scaffold_197_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10993..12051)
DNA (1059bp) protein (353aa)
GutB protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FXQ2_SORC5
gutB; hypothetical protein
GutB protein {ECO:0000313|EMBL:CAN95537.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (s
sw_11_scaffold_197_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12048..12749)
DNA (702bp) protein (234aa)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDP1_RHOMR
class II aldolase/adducin family protein
Class II aldolase/adducin family protein {ECO:0000313|EMBL:AHG92420.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_11_scaffold_197_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12861..14564)
DNA (1704bp) protein (568aa)
Ribulokinase {ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|SAAS:SAAS00183333};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribulokinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MES1_RHOM4
Carbohydrate kinase, FGGY
sw_11_scaffold_197_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14585..15634)
DNA (1050bp) protein (350aa)
Transcriptional regulator, LacI family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MES9_RHOM4
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACY47379.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
sw_11_scaffold_197_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15925..16605)
DNA (681bp) protein (227aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494, ECO:0000313|EMBL:CBH23272.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Probable transaldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5G7_SALRM
tal; transaldolase
sw_11_scaffold_197_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16694..18721)
DNA (2028bp) protein (676aa)
Transketolase {ECO:0000313|EMBL:CBH23271.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CBH23271.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
Transketolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5G6_SALRM
tktA; transketolase
sw_11_scaffold_197_18
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18814..20229)
DNA (1416bp) protein (472aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00008909};; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteral
L-arabinose isomerase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IFP8_THETR
L-arabinose isomerase
sw_11_scaffold_197_19
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20298..21443)
DNA (1146bp) protein (382aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=626887 species="Bacteria; Proteobacteria; G
Aldose 1-epimerase n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WQU5_9ALTE
aldose 1-epimerase
sw_11_scaffold_197_20
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(21527..23179)
DNA (1653bp) protein (551aa)
Alpha-L-arabinofuranosidase C-terminal domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLB6_9BACT
Alpha-L-arabinofuranosidase C-terminal domain family {ECO:0000313|EMBL:EDY85258.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae ba
alpha-L-arabinofuranosidase domain protein
sw_11_scaffold_197_21
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

23531..23689
DNA (159bp) protein (53aa)
Na+/glucose cotransporter
Na+/glucose cotransporter id=4436365 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Na+/glucose cotransporter Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Displaying 21 items

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