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sw_11_scaffold_216

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_216_1
unknown

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comp(3..134)
DNA (132bp) protein (44aa)

This feature has no annotations

sw_11_scaffold_216_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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319..1263
DNA (945bp) protein (315aa)
Malate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00487}; EC=1.1.1.37 {ECO:0000255|HAMAP-Rule:MF_00487};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
Malate dehydrogenase n=2 Tax=Salinibacter ruber RepID=MDH_SALRD
mdh; malate dehydrogenase
sw_11_scaffold_216_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1320..2342)
DNA (1023bp) protein (341aa)
mmt1; Co/Zn/Cd cation transporter
cation efflux family protein id=24659525 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Predicted Co/Zn/Cd cation transporter {ECO:0000313|EMBL:CBH24691.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
sw_11_scaffold_216_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2417..3592
DNA (1176bp) protein (392aa)
Glyoxalase family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S287_SALRD
glyoxalase family protein
Glyoxalase family protein {ECO:0000313|EMBL:ABC44134.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_11_scaffold_216_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3759..4640
DNA (882bp) protein (294aa)
Oxidoreductase, Aldo/keto reductase family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9I7_SALRM
mocA; oxidoreductase, Aldo/keto reductase family
Oxidoreductase, Aldo/keto reductase family {ECO:0000313|EMBL:CBH24692.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
sw_11_scaffold_216_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4656..5165
DNA (510bp) protein (170aa)
hypothetical protein
hypothetical protein id=24659528 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24693.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_216_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5446..6141
DNA (696bp) protein (232aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9I9_SALRM
msrA; methionine-S-sulfoxide reductase
sw_11_scaffold_216_8
Gracilimonas tropica, Gracilimonas, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6205..6864)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036E8147
sw_11_scaffold_216_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7081..8982
DNA (1902bp) protein (634aa)
UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203}; TaxID=309807 species="Ba
uvrC; excinuclease ABC subunit C
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C id=24659533 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_11_scaffold_216_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9117..9743)
DNA (627bp) protein (209aa)
Pyrazinamidase/nicotinamidase {ECO:0000313|EMBL:ABC45428.1}; EC=3.5.1.19 {ECO:0000313|EMBL:ABC45428.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
Pyrazinamidase/nicotinamidase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2K0_SALRD
pncA; pyrazinamidase/nicotinamidase
sw_11_scaffold_216_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10139..11572
DNA (1434bp) protein (478aa)
Aldehyde dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H965_SALRM
aldH; Aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492, ECO:0000313|EMBL:CBH24570.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacte
sw_11_scaffold_216_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11617..11892
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H963_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24568.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_216_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11907..12284)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H962_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24567.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_216_14
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(12315..12764)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U7B9_CYAP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN12506.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
sw_11_scaffold_216_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12978..13538)
DNA (561bp) protein (187aa)
hypothetical protein
hypothetical protein id=24659399 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44352.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_216_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13929..15428)
DNA (1500bp) protein (500aa)
nuoN; proton-translocating NADH-quinone oxidoreductase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] id=24659398 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
nuoN; proton-translocating NADH-quinone oxidoreductase subunit N
sw_11_scaffold_216_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15506..15802)
DNA (297bp) protein (99aa)
pterin-4-alpha-carbinolamine dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=24659397 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
pterin-4-alpha-carbinolamine dehydratase
sw_11_scaffold_216_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15842..16744)
DNA (903bp) protein (301aa)
NADH dehydrogenase I chain M {ECO:0000313|EMBL:CBH24559.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CBH24559.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
NADH dehydrogenase i, m subunit n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2L1_SALRD
nuoM; NADH dehydrogenase I subunit M
Displaying 18 items

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