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sw_11_scaffold_254

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_254_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..465
DNA (465bp) protein (155aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; Flags: Precursor;;
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHP9_RHOM4
monofunctional biosynthetic peptidoglycan transglycosylase
sw_11_scaffold_254_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

500..1543
DNA (1044bp) protein (348aa)
Threonine aldolase {ECO:0000313|EMBL:CBH24536.1}; EC=4.1.2.5 {ECO:0000313|EMBL:CBH24536.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
Threonine aldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H931_SALRM
ltaE; threonine aldolase
sw_11_scaffold_254_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1559..2170)
DNA (612bp) protein (204aa)
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:CBH24535.1}; EC=1.4.3.5 {ECO:0000313|EMBL:CBH24535.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
pdxH; pyridoxamine 5'-phosphate oxidase
pyridoxamine 5'-phosphate oxidase family protein id=24659372 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_11_scaffold_254_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2430..3092)
DNA (663bp) protein (221aa)
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=2 Tax=Salinibacter ruber RepID=D5H929_SALRM
mhpD; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:ABC44266.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
sw_11_scaffold_254_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


3227..3697
DNA (471bp) protein (157aa)
50S ribosomal protein L21 n=2 Tax=Salinibacter ruber RepID=RL21_SALRD
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_11_scaffold_254_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


3749..4009
DNA (261bp) protein (87aa)
rpmA; 50S ribosomal protein L27
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=24659369 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539, ECO:0000313|EMBL:CBH24532.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_11_scaffold_254_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4313..5554
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H926_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24531.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_254_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5547..6473)
DNA (927bp) protein (309aa)
hypothetical protein
hypothetical protein; K09933 hypothetical protein id=24659367 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24530.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_254_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6743..8818
DNA (2076bp) protein (692aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8] id=24659366 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
peptidyl-prolyl cis-trans isomerase
sw_11_scaffold_254_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8867..9706)
DNA (840bp) protein (280aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H923_SALRM
dapF; diaminopimelate epimerase
sw_11_scaffold_254_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9840..10799
DNA (960bp) protein (320aa)
PhoH family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2P3_SALRD
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:ABC43690.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_11_scaffold_254_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10926..11531)
DNA (606bp) protein (202aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] id=24659363 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ABC45405.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ABC45405.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
3-hydroxybutyryl-CoA dehydrogenase
sw_11_scaffold_254_13
unknown

Not on your lists

13247..13717
DNA (471bp) protein (157aa)

This feature has no annotations

sw_11_scaffold_254_14
unknown

Not on your lists

comp(14383..14502)
DNA (120bp) protein (40aa)

This feature has no annotations

sw_11_scaffold_254_15
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15036..15926
DNA (891bp) protein (297aa)
hypothetical protein id=5026843 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
sw_11_scaffold_254_16
unknown

Not on your lists

comp(16163..16273)
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 16 items

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