ggKbase home page

sw_11_scaffold_756

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_756_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

97..1152
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000382405A
sulfatase-modifying factor protein
Sulphatase-modifying factor protein {ECO:0000313|EMBL:AEI46583.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (stra
sw_11_scaffold_756_2
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(1243..2559)
DNA (1317bp) protein (439aa)
N-acetylglucosamine-6-sulfatase (EC:3.1.6.14) Tax=RBG_13_Planctomycetes_62_9_curated
Choline-sulfatase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQ91_9BACT
acetylglucosamine-6-sulfatase
sw_11_scaffold_756_trna_1
unknown

Not on your lists

comp(2727..2799)
DNA (73bp)
transferRNA
sw_11_scaffold_756_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3031..3771
DNA (741bp) protein (247aa)
dapB; dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26] id=24659002 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018107}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
dapB; dihydrodipicolinate reductase
sw_11_scaffold_756_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3825..4730
DNA (906bp) protein (302aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Salinibacter ruber RepID=DAPA_SALRD
dapA; dihydrodipicolinate synthase
sw_11_scaffold_756_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4889..5356)
DNA (468bp) protein (156aa)
hypothetical protein
hypothetical protein id=24659000 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45309.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_756_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5416..6849)
DNA (1434bp) protein (478aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:ABC45114.1}; EC=3.4.16.4 {ECO:0000313|EMBL:ABC45114.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroid
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3M3_SALRD
dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
sw_11_scaffold_756_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7016..7276
DNA (261bp) protein (87aa)
hypothetical protein
hypothetical protein id=24658998 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24196.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_756_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7270..8349)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3M5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44179.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_756_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8450..8878)
DNA (429bp) protein (143aa)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=2 Tax=Salinibacter ruber RepID=NDK_SALRD
ndk; nucleoside diphosphate kinase
sw_11_scaffold_756_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9133..9687
DNA (555bp) protein (185aa)
msrA; peptide methionine sulfoxide reductase MsrA; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=24658995 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
msrA; peptide methionine sulfoxide reductase MsrA
sw_11_scaffold_756_11
unknown

Not on your lists

9885..10265
DNA (381bp) protein (127aa)

This feature has no annotations

sw_11_scaffold_756_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10478..10714
DNA (237bp) protein (79aa)
hypothetical protein
hypothetical protein id=24658993 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45424.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_756_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10774..11928
DNA (1155bp) protein (385aa)
Glycosyl transferase, group 1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H835_SALRM
rfaG; group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:CBH24190.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
Displaying 14 items

View Taxonomy