ggKbase home page

sw_11_scaffold_1085

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1085_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..793)
DNA (792bp) protein (264aa)
FO synthase subunit 2 {ECO:0000256|HAMAP-Rule:MF_01612}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01612};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2 {ECO:0000256|HAMAP-Rule:MF_01612}
FO synthase subunit 2 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KLT6_HALAR
cofH; FO synthase subunit 2
sw_11_scaffold_1085_2
Actinoplanes teichomyceticus, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1064..1570)
DNA (507bp) protein (169aa)
TecR protein {ECO:0000313|EMBL:CAA40250.1}; TaxID=1867 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes teichomyceticus.;"
sw_11_scaffold_1085_3
unknown

Not on your lists

comp(1558..1875)
DNA (318bp) protein (106aa)

This feature has no annotations

sw_11_scaffold_1085_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1908..3101
DNA (1194bp) protein (398aa)
alkK_4; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3 6.2.1.-)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M6A9_HALMO
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EMA41352.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhua
sw_11_scaffold_1085_5

Not on your lists

comp(3272..3460)
DNA (189bp) protein (63aa)
Choline dehydrogenase related flavoprotein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XS69_9ARCH
Choline dehydrogenase related flavoprotein {ECO:0000313|EMBL:ESS05013.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
Choline dehydrogenase
sw_11_scaffold_1085_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3699..5546
DNA (1848bp) protein (616aa)
Threonine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00184}; Short=ThrRS {ECO:0000255|HAMAP-Rule
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYT_NATPD
sw_11_scaffold_1085_7
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5543..5920
DNA (378bp) protein (126aa)
Thioesterase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LB29_9EURY
Thioesterase {ECO:0000313|EMBL:EMA30772.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
thioesterase superfamily protein
sw_11_scaffold_1085_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5921..6271)
DNA (351bp) protein (117aa)
PspA domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRE6_NATPD
pspA; stress response protein
PspA domain protein {ECO:0000313|EMBL:CAI49297.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_11_scaffold_1085_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6674..7258
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQE4_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36378.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_11_scaffold_1085_10
unknown

Not on your lists

7336..7941
DNA (606bp) protein (202aa)

This feature has no annotations

sw_11_scaffold_1085_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8556..10202
DNA (1647bp) protein (549aa)
pyrG; CTP synthase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227};
CTP synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XT61_NATM8
sw_11_scaffold_1085_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10202..11119
DNA (918bp) protein (306aa)
guaAb; GMP synthase subunit B (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] subunit B {ECO:0000255|HAMAP-Rule:MF_00345}; EC=6.3.5.2 {ECO:0000255|HAMAP-Rule:MF_00345};; GMP synthetase {ECO:0000255|HAMAP-Rule:MF_00345}; TaxID=348780 species=
GMP synthase [glutamine-hydrolyzing] subunit B n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GUAAB_NATPD
sw_11_scaffold_1085_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11112..11432
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS13_NATPD
CTP/GMP synthase operon protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49077.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_1085_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11437..12111)
DNA (675bp) protein (225aa)
hydrolase ( hydroxyacylglutathione hydrolase ) 9 (EC:3.1.2.6)
Probable metallo-beta-lactamase family hydrolase n=2 Tax=Natronomonas pharaonis RepID=Q3IS12_NATPD
Beta-lactamase domain protein {ECO:0000313|EMBL:CAI49078.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_11_scaffold_1085_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12302..13039)
DNA (738bp) protein (246aa)
Transcription regulator (Homolog to phosphate uptake regulator) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS11_NATPD
abc14r_1; ABC transporter
Transcription regulator (Homolog to phosphate uptake regulator) {ECO:0000313|EMBL:CAI49079.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
sw_11_scaffold_1085_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13496..14311
DNA (816bp) protein (272aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
ABC-type transport system ATP-binding protein (Probable substrate phosphate) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4Z7_NATM8
pstB1; ABC-type transport system ATP-binding protein (probable substrate phosphate)
sw_11_scaffold_1085_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14142..14492)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NE46_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54950.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_11_scaffold_1085_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14636..15316
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS06_NATPD
abc14r_2; ABC transporter
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
sw_11_scaffold_1085_19
unknown

Not on your lists

comp(15313..15414)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 19 items

View Taxonomy