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sw_11_scaffold_1125

Search features with annotation key words

Displaying 8 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1125_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1187)
DNA (1185bp) protein (395aa)
FAD dependent oxidoreductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGB3_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:ELZ34511.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum palli
glucose-methanol-choline oxidoreductase
sw_11_scaffold_1125_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1184..1699)
DNA (516bp) protein (172aa)
Gluconate 2-dehydrogenase subunit 3 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFC1_9EURY
gluconate 2-dehydrogenase subunit 3
Gluconate 2-dehydrogenase subunit 3 {ECO:0000313|EMBL:CCQ33925.1}; Twin arginine translocation signal domain containing protein {ECO:0000313|EMBL:ERJ05751.1}; TaxID=1033806 species="Archaea; Euryarcha
sw_11_scaffold_1125_3
unknown

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comp(1741..2616)
DNA (876bp) protein (292aa)

This feature has no annotations

sw_11_scaffold_1125_4
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2749..4332)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L3K8_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA27009.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
sw_11_scaffold_1125_5
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4774..5868
DNA (1095bp) protein (365aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DV24_9EURY
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:ELZ39356.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
amidohydrolase
sw_11_scaffold_1125_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5923..6225)
DNA (303bp) protein (101aa)
Transcriptional regulator, AsnC family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVV1_HALBP
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADQ69171.1}; Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ELY31719.1}; TaxID=469382 species="Archaea; Euryarchaeota; Haloba
sw_11_scaffold_1125_7
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6400..8364
DNA (1965bp) protein (655aa)
Putative alpha-D-14-glucosidase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KS84_9EURY
alpha-amylase
Alpha-amylase {ECO:0000313|EMBL:AJF25106.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_11_scaffold_1125_8
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8479..9177)
DNA (699bp) protein (233aa)
Putative IS1341-type transposase (TCE32) n=2 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R4C6_HALMT
IS1341-type transposase (TCE32)
Putative IS1341-type transposase (TCE32) {ECO:0000313|EMBL:EMA04015.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax medite
Displaying 8 items

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